Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:39434710-40071320

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr36788 4 39450268 to 39450314 46 + TSS region transcription start site region 36788
1700009N14Rik 4 39450295 to 39451776 1481 + protein coding gene RIKEN cDNA 1700009N14 gene
Tssr36789 4 39450316 to 39450331 15 + TSS region transcription start site region 36789
D4Mit196 4 39452126 to 39452312 186 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 196
vsd 4 39452126 to 56769494 17317368 heritable phenotypic marker ventricular septal defect
Habiir2 4 39452126 to 63365441 23913315 QTL hyperoxic acute lung injury imprinted region 2
D4Dcr35 4 39478641 to 39478751 110 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 35
Gm42271 4 39495705 to 39508994 13289 - lncRNA gene predicted gene, 42271
Gm42272 4 39708728 to 39712169 3441 - lncRNA gene predicted gene, 42272
Gm34007 4 39714710 to 39791320 76610 - lncRNA gene predicted gene, 34007
Tssr1138 4 39740758 to 39740759 1 + TSS region transcription start site region 1138
Gm12385 4 39767618 to 39768412 794 + pseudogene predicted gene 12385
Gm34071 4 39788744 to 39792398 3654 + lncRNA gene predicted gene, 34071
Gm12384 4 39823722 to 39824365 643 + pseudogene predicted gene 12384
Gm12386 4 39844187 to 39844874 687 - pseudogene predicted gene 12386
Gm22850 4 39865687 to 39865768 81 + snRNA gene predicted gene, 22850
Gm12387 4 39895208 to 39896162 954 - pseudogene predicted gene 12387
Gm34132 4 39936874 to 39952708 15834 - lncRNA gene predicted gene, 34132
Gm26087 4 39981497 to 39981558 61 - snRNA gene predicted gene, 26087
Tssr41234 4 40063792 to 40063811 19 - TSS region transcription start site region 41234
Gm12388 4 40069139 to 40070981 1842 + pseudogene predicted gene 12388