Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:36859199-38919873

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Flal3 4 35000000 to 37000000 2000000 QTL fatty liver accumulation QTL 3, females only
Lingo2 4 35706647 to 36951747 1245100 - protein coding gene leucine rich repeat and Ig domain containing 2
Tssr41228 4 36936311 to 36936315 4 - TSS region transcription start site region 41228
Cpgi14132 4 36950226 to 36950957 731 CpG island CpG island 14132
Cpgi14133 4 36951146 to 36952100 954 CpG island CpG island 14133
Tssr41229 4 36951689 to 36951759 70 - TSS region transcription start site region 41229
Tssr36785 4 36952930 to 36952970 40 + TSS region transcription start site region 36785
Gm12371 4 36952966 to 36988032 35066 + lincRNA gene predicted gene 12371
Gm42269 4 37086049 to 37099185 13136 + lncRNA gene predicted gene, 42269
Gm12372 4 37139107 to 37139874 767 - pseudogene predicted gene 12372
D4Mit107 4 37171886 to 37172023 137 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 107
Rpl23a-ps6 4 37238708 to 37239175 467 - pseudogene ribosomal protein 23A, pseudogene 6
Gm12374 4 37294197 to 37332515 38318 + lincRNA gene predicted gene 12374
Gm22732 4 37297905 to 37298025 120 + snoRNA gene predicted gene, 22732
Gm12375 4 37889199 to 37889873 674 - pseudogene predicted gene 12375
Tssr36786 4 37970366 to 37970399 33 + TSS region transcription start site region 36786
Gm12378 4 37970874 to 37972331 1457 + pseudogene predicted gene 12378
Gm12379 4 38028845 to 38029273 428 + pseudogene predicted gene 12379
Tssr1137 4 38256534 to 38256535 1 + TSS region transcription start site region 1137
Tssr36787 4 38263871 to 38263876 5 + TSS region transcription start site region 36787
Gm12380 4 38263918 to 38264461 543 + pseudogene predicted gene 12380
D4Mit108 4 38372089 to 38372221 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 108
Gm12381 4 38571667 to 38855483 283816 - lincRNA gene predicted gene 12381
Gm12382 4 38663814 to 38664730 916 + pseudogene predicted gene 12382
Tssr41230 4 38804016 to 38804018 2 - TSS region transcription start site region 41230
Tssr41231 4 38812858 to 38812868 10 - TSS region transcription start site region 41231
Tssr41232 4 38855461 to 38855472 11 - TSS region transcription start site region 41232