Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:34883181-35183352

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14124 4 34882325 to 34883275 950 CpG island CpG island 14124
Cpgi14125 4 34886537 to 34887140 603 CpG island CpG island 14125
Tssr36773 4 34886642 to 34886654 12 + TSS region transcription start site region 36773
Tssr36774 4 34886688 to 34886712 24 + TSS region transcription start site region 36774
A330027G23Rik 4 34886711 to 34889905 3194 unclassified gene RIKEN cDNA A330027G23 gene
D4Mit41 4 34892515 to 34892635 120 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 41
Nbwa2 4 34892515 to 34892635 120 QTL NZB and NZW autoimmunity 2
D4Nds3 4 34892543 to 34892680 137 DNA segment DNA segment, Chr 4, Nuffield Department of Surgery 3
Tssr36775 4 34893729 to 34893738 9 + TSS region transcription start site region 36775
Tssr36776 4 34893751 to 34893759 8 + TSS region transcription start site region 36776
Tssr36777 4 34893761 to 34893766 5 + TSS region transcription start site region 36777
Tssr36778 4 34893772 to 34893787 15 + TSS region transcription start site region 36778
Cga 4 34893779 to 34907370 13591 + protein coding gene glycoprotein hormones, alpha subunit
Tssr36779 4 34893794 to 34893816 22 + TSS region transcription start site region 36779
Tssr36780 4 34905149 to 34905158 9 + TSS region transcription start site region 36780
Platr9 4 34909789 to 34911481 1692 - lncRNA gene pluripotency associated transcript 9
Gm12361 4 34919134 to 34920517 1383 + pseudogene predicted gene 12361
Gm12362 4 34941008 to 34941349 341 - pseudogene predicted gene 12362
Cpgi14126 4 34941231 to 34941430 199 CpG island CpG island 14126
Mob3b 4 34949074 to 35157484 208410 - protein coding gene MOB kinase activator 3B
Tssr1136 4 34950665 to 34950669 4 - TSS region transcription start site region 1136
Tssr41209 4 34952456 to 34952464 8 - TSS region transcription start site region 41209
Gm12364 4 34962220 to 34966965 4745 + antisense lncRNA gene predicted gene 12364
D4Ertd628e 4 34978570 to 34978819 249 DNA segment DNA segment, Chr 4, ERATO Doi 628, expressed
Gm33620 4 34986545 to 35001497 14952 + lncRNA gene predicted gene, 33620
Flal3 4 35000000 to 37000000 2000000 QTL fatty liver accumulation QTL 3, females only
Tssr41210 4 35020015 to 35020026 11 - TSS region transcription start site region 41210
D4Mit39 4 35033181 to 35033352 171 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 39
Tssr41211 4 35035610 to 35035614 4 - TSS region transcription start site region 41211
Cpgi14127 4 35096403 to 35096903 500 CpG island CpG island 14127
Cpgi14128 4 35100078 to 35100357 279 CpG island CpG island 14128
Tssr41212 4 35113623 to 35113672 49 - TSS region transcription start site region 41212
Tssr41213 4 35125336 to 35125348 12 - TSS region transcription start site region 41213
Tssr41214 4 35130757 to 35130761 4 - TSS region transcription start site region 41214
Ifnk 4 35152056 to 35154005 1949 + protein coding gene interferon kappa
Cpgi14129 4 35155879 to 35157613 1734 CpG island CpG island 14129
Tssr41215 4 35157404 to 35157500 96 - TSS region transcription start site region 41215
Tssr41216 4 35158249 to 35158260 11 - TSS region transcription start site region 41216