Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:154942358-155143938

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(4D4Mit190-D4Mit51)2Aam 4 150704851 to 155046016 4341165 chromosomal deletion deletion, Chr 4, Alea A Mills 2
Dp(4D4Mit190-D4Mit51)1Aam 4 150704851 to 155046016 4341165 chromosomal duplication duplication, Chr 4, Alea A Mills 1
Tssr40610 4 154942964 to 154942978 14 + TSS region transcription start site region 40610
Tssr40611 4 154943003 to 154943019 16 + TSS region transcription start site region 40611
Tssr44911 4 154944125 to 154944135 10 - TSS region transcription start site region 44911
Tssr44912 4 154944177 to 154944188 11 - TSS region transcription start site region 44912
Tssr44913 4 154946443 to 154946446 3 - TSS region transcription start site region 44913
Cpgi15451 4 154952636 to 154953125 489 CpG island CpG island 15451
Cpgi15452 4 154960070 to 154961889 1819 CpG island CpG island 15452
Gm20421 4 154960770 to 154961678 908 - unclassified non-coding RNA gene predicted gene 20421
Tssr40612 4 154960915 to 154960930 15 + TSS region transcription start site region 40612
Hes5 4 154960923 to 154962371 1448 + protein coding gene hes family bHLH transcription factor 5
Tssr40613 4 154961000 to 154961017 17 + TSS region transcription start site region 40613
Tssr40614 4 154961177 to 154961189 12 + TSS region transcription start site region 40614
Tssr40615 4 154961398 to 154961418 20 + TSS region transcription start site region 40615
Tssr40616 4 154961463 to 154961474 11 + TSS region transcription start site region 40616
Cpgi15453 4 154963689 to 154965131 1442 CpG island CpG island 15453
Tssr40617 4 154964117 to 154964147 30 + TSS region transcription start site region 40617
Pank4 4 154964123 to 154980938 16815 + protein coding gene pantothenate kinase 4
Gm42363 4 154964284 to 154965313 1029 + lncRNA gene predicted gene, 42363
Tssr44914 4 154964343 to 154964361 18 - TSS region transcription start site region 44914
Tssr40618 4 154965072 to 154965101 29 + TSS region transcription start site region 40618
Plch2 4 154983115 to 155056784 73669 - protein coding gene phospholipase C, eta 2
Cpgi15454 4 154983761 to 154984304 543 CpG island CpG island 15454
Cpgi15455 4 154986106 to 154986286 180 CpG island CpG island 15455
D4Mit256.2 4 154990377 to 154990489 112 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 256.2
D4Mit256 4 154990439 to 154990571 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 256
Tssr44915 4 155011006 to 155011026 20 - TSS region transcription start site region 44915
Tssr44916 4 155019383 to 155019391 8 - TSS region transcription start site region 44916
Tssr44917 4 155019397 to 155019398 1 - TSS region transcription start site region 44917
Tssr44918 4 155019399 to 155019437 38 - TSS region transcription start site region 44918
Gm10564 4 155042046 to 155045422 3376 + antisense lncRNA gene predicted gene 10564
Cpgi15456 4 155042358 to 155043938 1580 CpG island CpG island 15456
Tssr44919 4 155043143 to 155043172 29 - TSS region transcription start site region 44919
D4Mit51 4 155045894 to 155046016 122 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 51
Tssr44920 4 155056784 to 155056827 43 - TSS region transcription start site region 44920
Tssr44921 4 155064013 to 155064045 32 - TSS region transcription start site region 44921
Tssr44922 4 155064046 to 155064066 20 - TSS region transcription start site region 44922
Cpgi15457 4 155066572 to 155067539 967 CpG island CpG island 15457
Tssr40619 4 155067028 to 155067064 36 + TSS region transcription start site region 40619
Pex10 4 155067030 to 155072406 5376 + protein coding gene peroxisomal biogenesis factor 10
Rer1 4 155074109 to 155086381 12272 - protein coding gene retention in endoplasmic reticulum sorting receptor 1
Tssr44923 4 155080836 to 155080879 43 - TSS region transcription start site region 44923
Cpgi15458 4 155085703 to 155087149 1446 CpG island CpG island 15458
Tssr44924 4 155086248 to 155086265 17 - TSS region transcription start site region 44924
Tssr44925 4 155086271 to 155086379 108 - TSS region transcription start site region 44925
Morn1 4 155086577 to 155145505 58928 + protein coding gene MORN repeat containing 1
Tssr40620 4 155086578 to 155086610 32 + TSS region transcription start site region 40620
Cpgi15459 4 155093000 to 155093211 211 CpG island CpG island 15459
Tssr40621 4 155095889 to 155095898 9 + TSS region transcription start site region 40621
Tssr1397 4 155111289 to 155111292 3 + TSS region transcription start site region 1397