Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:122896035-123096093

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12891 4 122925833 to 122926072 239 + pseudogene predicted gene 12891
Tssr43224 4 122927457 to 122927463 6 - TSS region transcription start site region 43224
Tssr38834 4 122933247 to 122933279 32 + TSS region transcription start site region 38834
Tssr43225 4 122933942 to 122933954 12 - TSS region transcription start site region 43225
Tssr43226 4 122933962 to 122933997 35 - TSS region transcription start site region 43226
Tssr43227 4 122934027 to 122934039 12 - TSS region transcription start site region 43227
Tssr38835 4 122935261 to 122935271 10 + TSS region transcription start site region 38835
Tssr38836 4 122936523 to 122936528 5 + TSS region transcription start site region 38836
Tssr43228 4 122939531 to 122939536 5 - TSS region transcription start site region 43228
Mfsd2a 4 122946850 to 122961188 14338 - protein coding gene major facilitator superfamily domain containing 2A
Tssr43229 4 122950223 to 122950229 6 - TSS region transcription start site region 43229
Cpgi14738 4 122955427 to 122955620 193 CpG island CpG island 14738
Tssr43230 4 122955510 to 122955533 23 - TSS region transcription start site region 43230
Cpgi14739 4 122960449 to 122961403 954 CpG island CpG island 14739
Tssr43231 4 122961173 to 122961193 20 - TSS region transcription start site region 43231
Tssr38837 4 122961274 to 122961349 75 + TSS region transcription start site region 38837
4933421A08Rik 4 122961309 to 122963475 2166 + unclassified gene RIKEN cDNA 4933421A08 gene
Tssr43232 4 122961449 to 122961453 4 - TSS region transcription start site region 43232
Tssr38838 4 122971490 to 122971493 3 + TSS region transcription start site region 38838
Cpgi14740 4 122983457 to 122983786 329 CpG island CpG island 14740
Cpgi14741 4 122995467 to 122997242 1775 CpG island CpG island 14741
Tssr1289 4 122995614 to 122995626 12 + TSS region transcription start site region 1289
Mycl 4 122995652 to 123002485 6833 + protein coding gene v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
Tssr38839 4 122995944 to 122995958 14 + TSS region transcription start site region 38839
Tssr38840 4 122996035 to 122996093 58 + TSS region transcription start site region 38840
Tssr38841 4 122998835 to 122998847 12 + TSS region transcription start site region 38841
Cpgi14742 4 123016357 to 123016981 624 CpG island CpG island 14742
Tssr38842 4 123016590 to 123016613 23 + TSS region transcription start site region 38842
Trit1 4 123016597 to 123054949 38352 + protein coding gene tRNA isopentenyltransferase 1
Tssr38843 4 123016632 to 123016639 7 + TSS region transcription start site region 38843
Tssr38844 4 123081035 to 123081052 17 + TSS region transcription start site region 38844
Gm46868 4 123081151 to 123089356 8205 + lncRNA gene predicted gene, 46868
Gm12923 4 123092765 to 123094028 1263 - antisense lncRNA gene predicted gene 12923