Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96481390-96533780

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28001 3 96485161 to 96485277 116 + rRNA gene predicted gene, 28001
Gm25890 3 96486555 to 96486719 164 - snRNA gene predicted gene, 25890
Gm22614 3 96488729 to 96488893 164 + snRNA gene predicted gene, 22614
Cpgi13563 3 96497294 to 96497594 300 CpG island CpG island 13563
n-TNgtt12 3 96497781 to 96497854 73 + tRNA gene nuclear encoded tRNA asparagine 12 (anticodon GTT)
n-TKctt16 3 96499512 to 96499584 72 - tRNA gene nuclear encoded tRNA lysine 16 (anticodon CTT)
Cpgi13564 3 96499723 to 96500593 870 CpG island CpG island 13564
n-THgtg8 3 96500366 to 96500437 71 - tRNA gene nuclear encoded tRNA histidine 8 (anticodon GTG)
n-TGtcc7 3 96501009 to 96501080 71 - tRNA gene nuclear encoded tRNA glycine 7 (anticodon TCC)
n-TEctc13 3 96501447 to 96501518 71 - tRNA gene nuclear encoded tRNA glutamic acid 13 (anticodon CTC)
Gm40100 3 96506390 to 96508780 2390 - lncRNA gene predicted gene, 40100
Tssr30716 3 96520453 to 96520462 9 + TSS region transcription start site region 30716
Tssr30717 3 96525163 to 96525186 23 + TSS region transcription start site region 30717
Hjv 3 96525172 to 96529210 4038 + protein coding gene hemojuvelin BMP co-receptor
Tssr30718 3 96525192 to 96525219 27 + TSS region transcription start site region 30718
Cpgi13565 3 96526828 to 96527630 802 CpG island CpG island 13565
Cpgi13566 3 96528302 to 96528589 287 CpG island CpG island 13566
Tssr30719 3 96528612 to 96528614 2 + TSS region transcription start site region 30719