Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:89431371-89741373

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pygo2 3 89430214 to 89435128 4914 + protein coding gene pygopus 2
Tssr30115 3 89432470 to 89432495 25 + TSS region transcription start site region 30115
Tssr30116 3 89432899 to 89432933 34 + TSS region transcription start site region 30116
Tssr30117 3 89436699 to 89436734 35 + TSS region transcription start site region 30117
Pbxip1 3 89436706 to 89450952 14246 + protein coding gene pre B cell leukemia transcription factor interacting protein 1
Tssr30118 3 89436736 to 89436761 25 + TSS region transcription start site region 30118
Tssr30119 3 89436879 to 89436892 13 + TSS region transcription start site region 30119
Tssr942 3 89437531 to 89437573 42 + TSS region transcription start site region 942
Tssr30120 3 89450385 to 89450404 19 + TSS region transcription start site region 30120
Pmvk 3 89454541 to 89469009 14468 + protein coding gene phosphomevalonate kinase
Tssr34142 3 89455282 to 89455307 25 - TSS region transcription start site region 34142
Tssr34143 3 89458754 to 89458774 20 - TSS region transcription start site region 34143
Tssr30121 3 89459167 to 89459178 11 + TSS region transcription start site region 30121
Tssr30122 3 89459186 to 89459214 28 + TSS region transcription start site region 30122
Cpgi13433 3 89459186 to 89459588 402 CpG island CpG island 13433
Tssr30123 3 89459276 to 89459289 13 + TSS region transcription start site region 30123
Tssr30124 3 89459297 to 89459321 24 + TSS region transcription start site region 30124
Tssr30125 3 89459325 to 89459360 35 + TSS region transcription start site region 30125
Cpgi13434 3 89485243 to 89485421 178 CpG island CpG island 13434
Cpgi13435 3 89519807 to 89520079 272 CpG island CpG island 13435
Tssr30126 3 89520152 to 89520175 23 + TSS region transcription start site region 30126
Kcnn3 3 89520164 to 89672494 152330 + protein coding gene potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Cpgi13436 3 89520570 to 89521061 491 CpG island CpG island 13436
Cpgi13437 3 89522085 to 89522251 166 CpG island CpG island 13437
Tssr30127 3 89586371 to 89586373 2 + TSS region transcription start site region 30127
Tssr34144 3 89655140 to 89655170 30 - TSS region transcription start site region 34144
Tssr30128 3 89662519 to 89662552 33 + TSS region transcription start site region 30128
Tssr30129 3 89662681 to 89662716 35 + TSS region transcription start site region 30129
Tssr30130 3 89662717 to 89662728 11 + TSS region transcription start site region 30130
Tssr34145 3 89667249 to 89667260 11 - TSS region transcription start site region 34145
Tssr34146 3 89667280 to 89667287 7 - TSS region transcription start site region 34146
Tssr34147 3 89683181 to 89683189 8 - TSS region transcription start site region 34147
Cpgi13438 3 89688878 to 89689227 349 CpG island CpG island 13438
Cpgi13439 3 89714925 to 89715786 861 CpG island CpG island 13439
Tssr30131 3 89715016 to 89715084 68 + TSS region transcription start site region 30131
Adar 3 89715022 to 89753446 38424 + protein coding gene adenosine deaminase, RNA-specific
Cpgi13440 3 89730457 to 89730937 480 CpG island CpG island 13440
Tssr34148 3 89730551 to 89730562 11 - TSS region transcription start site region 34148
Tssr30132 3 89730735 to 89730786 51 + TSS region transcription start site region 30132
Tssr34149 3 89732315 to 89732326 11 - TSS region transcription start site region 34149
Tssr30133 3 89735689 to 89735716 27 + TSS region transcription start site region 30133
Tssr30134 3 89735789 to 89735805 16 + TSS region transcription start site region 30134