Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88162246-88212394

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mef2d 3 88142372 to 88172086 29714 + protein coding gene myocyte enhancer factor 2D
Tssr29911 3 88163043 to 88163053 10 + TSS region transcription start site region 29911
Tssr29912 3 88167572 to 88167588 16 + TSS region transcription start site region 29912
Tssr29913 3 88167594 to 88167654 60 + TSS region transcription start site region 29913
Tssr29914 3 88170324 to 88170336 12 + TSS region transcription start site region 29914
1700113A16Rik 3 88171560 to 88177785 6225 - antisense lncRNA gene RIKEN cDNA 1700113A16 gene
Cpgi13362 3 88177544 to 88178371 827 CpG island CpG island 13362
Tssr33991 3 88177671 to 88177783 112 - TSS region transcription start site region 33991
D3Mit74 3 88187246 to 88187394 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 74
AI849053 3 88199102 to 88204595 5493 - lincRNA gene expressed sequence AI849053
Tssr29915 3 88200255 to 88200269 14 + TSS region transcription start site region 29915
Tssr29916 3 88200270 to 88200279 9 + TSS region transcription start site region 29916
Tssr29917 3 88200285 to 88200318 33 + TSS region transcription start site region 29917
Cpgi13363 3 88200298 to 88201591 1293 CpG island CpG island 13363
Tssr29918 3 88200323 to 88200348 25 + TSS region transcription start site region 29918
Tssr29919 3 88200607 to 88200629 22 + TSS region transcription start site region 29919
AW047730 3 88200623 to 88203481 2858 + unclassified non-coding RNA gene expressed sequence AW047730
Tssr29920 3 88206525 to 88206537 12 + TSS region transcription start site region 29920
Tssr29921 3 88206786 to 88206824 38 + TSS region transcription start site region 29921
Gm3764 3 88206813 to 88229959 23146 + lincRNA gene predicted gene 3764
Tssr29922 3 88207100 to 88207135 35 + TSS region transcription start site region 29922
Cpgi13364 3 88207218 to 88207584 366 CpG island CpG island 13364
Tssr29923 3 88207255 to 88207305 50 + TSS region transcription start site region 29923
Tssr29924 3 88207308 to 88207328 20 + TSS region transcription start site region 29924