Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:84175718-84365735

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim2 3 84160439 to 84305841 145402 - protein coding gene tripartite motif-containing 2
Tssr29730 3 84180588 to 84180612 24 + TSS region transcription start site region 29730
Tssr29731 3 84189985 to 84190022 37 + TSS region transcription start site region 29731
Cpgi13306 3 84190404 to 84191286 882 CpG island CpG island 13306
Tssr33848 3 84191182 to 84191193 11 - TSS region transcription start site region 33848
Tssr33849 3 84191223 to 84191236 13 - TSS region transcription start site region 33849
Tssr33850 3 84191242 to 84191315 73 - TSS region transcription start site region 33850
Tssr33851 3 84220835 to 84220846 11 - TSS region transcription start site region 33851
Tssr33852 3 84220853 to 84220896 43 - TSS region transcription start site region 33852
Gm40078 3 84228694 to 84247037 18343 + lncRNA gene predicted gene, 40078
n-TGgcc9 3 84229011 to 84229081 70 - tRNA gene nuclear encoded tRNA glycine 9 (anticodon GCC)
Cpgi13307 3 84259141 to 84260022 881 CpG island CpG island 13307
Tssr33853 3 84259555 to 84259571 16 - TSS region transcription start site region 33853
Tssr33854 3 84259584 to 84259596 12 - TSS region transcription start site region 33854
Tssr33855 3 84259616 to 84259633 17 - TSS region transcription start site region 33855
Tssr33856 3 84259658 to 84259699 41 - TSS region transcription start site region 33856
Tssr33857 3 84259700 to 84259728 28 - TSS region transcription start site region 33857
Tssr33858 3 84259736 to 84259787 51 - TSS region transcription start site region 33858
Tssr33859 3 84259836 to 84259847 11 - TSS region transcription start site region 33859
Tssr33860 3 84259918 to 84259937 19 - TSS region transcription start site region 33860
Tssr33861 3 84270704 to 84270713 9 - TSS region transcription start site region 33861
Tssr33862 3 84270718 to 84270735 17 - TSS region transcription start site region 33862
Tssr33863 3 84270742 to 84270775 33 - TSS region transcription start site region 33863
Tssr33864 3 84270782 to 84270794 12 - TSS region transcription start site region 33864
Cpgi13308 3 84304299 to 84305586 1287 CpG island CpG island 13308
Tssr33865 3 84304647 to 84304660 13 - TSS region transcription start site region 33865
Tssr33866 3 84304678 to 84304692 14 - TSS region transcription start site region 33866
Tssr33867 3 84304733 to 84304753 20 - TSS region transcription start site region 33867
Tssr33868 3 84304762 to 84304782 20 - TSS region transcription start site region 33868
Tssr33869 3 84305385 to 84305456 71 - TSS region transcription start site region 33869
Cpgi13309 3 84334732 to 84335084 352 CpG island CpG island 13309
Tssr29732 3 84335559 to 84335574 15 + TSS region transcription start site region 29732
Cpgi13310 3 84345148 to 84345361 213 CpG island CpG island 13310
4930565D16Rik 3 84349376 to 84379921 30545 - lincRNA gene RIKEN cDNA 4930565D16 gene