Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
W10q3 | 3 | 73093478 | QTL | weight 10 weeks QTL 3 | ||
Lgq3 | 3 | 73093478 | QTL | late growth QTL 3 | ||
Lvrq5 | 3 | 73093478 | QTL | liver weight QTL 5 | ||
Hrtpq1 | 3 | 73093478 | QTL | heart weight percentage QTL 1 | ||
Lgaq4 | 3 | 73093478 | QTL | late growth adjusted QTL 4 | ||
Splq6 | 3 | 73093478 | QTL | spleen weight QTL 6 | ||
Fnip2 | 3 | 111822 | - | protein coding gene | folliculin interacting protein 2 | |
Tssr33698 | 3 | 17 | - | TSS region | transcription start site region 33698 | |
Gm36442 | 3 | 2306 | - | lncRNA gene | predicted gene, 36442 | |
Tssr33699 | 3 | 25 | - | TSS region | transcription start site region 33699 | |
Tssr33700 | 3 | 47 | - | TSS region | transcription start site region 33700 | |
Tssr33701 | 3 | 16 | - | TSS region | transcription start site region 33701 | |
Tssr33702 | 3 | 18 | - | TSS region | transcription start site region 33702 | |
Tssr33703 | 3 | 13 | - | TSS region | transcription start site region 33703 | |
Tssr33704 | 3 | 22 | - | TSS region | transcription start site region 33704 | |
Tssr29582 | 3 | 13 | + | TSS region | transcription start site region 29582 | |
Tssr33705 | 3 | 11 | - | TSS region | transcription start site region 33705 | |
Tssr33706 | 3 | 11 | - | TSS region | transcription start site region 33706 | |
Tssr33707 | 3 | 11 | - | TSS region | transcription start site region 33707 | |
Tssr33708 | 3 | 11 | - | TSS region | transcription start site region 33708 | |
Tssr33709 | 3 | 9 | - | TSS region | transcription start site region 33709 | |
Tssr33710 | 3 | 26 | - | TSS region | transcription start site region 33710 | |
Tssr33711 | 3 | 11 | - | TSS region | transcription start site region 33711 | |
Tssr33712 | 3 | 11 | - | TSS region | transcription start site region 33712 | |
Tssr33713 | 3 | 12 | - | TSS region | transcription start site region 33713 | |
Tssr29583 | 3 | 13 | + | TSS region | transcription start site region 29583 | |
Tssr33714 | 3 | 27 | - | TSS region | transcription start site region 33714 | |
Tssr33715 | 3 | 11 | - | TSS region | transcription start site region 33715 | |
Tssr33716 | 3 | 4 | - | TSS region | transcription start site region 33716 | |
Tssr33717 | 3 | 43 | - | TSS region | transcription start site region 33717 | |
Tssr29584 | 3 | 18 | + | TSS region | transcription start site region 29584 | |
Tssr33718 | 3 | 7 | - | TSS region | transcription start site region 33718 | |
Tssr33719 | 3 | 39 | - | TSS region | transcription start site region 33719 | |
Tssr33720 | 3 | 24 | - | TSS region | transcription start site region 33720 | |
Gm3513 | 3 | 879 | - | sense intronic lncRNA gene | predicted gene 3513 | |
Tssr33721 | 3 | 49 | - | TSS region | transcription start site region 33721 | |
Tssr33722 | 3 | 5 | - | TSS region | transcription start site region 33722 | |
Cpgi13275 | 3 | 1329 | CpG island | CpG island 13275 | ||
Tssr33723 | 3 | 17 | - | TSS region | transcription start site region 33723 | |
Tssr33724 | 3 | 9 | - | TSS region | transcription start site region 33724 | |
Tssr33725 | 3 | 17 | - | TSS region | transcription start site region 33725 | |
Tssr33726 | 3 | 19 | - | TSS region | transcription start site region 33726 | |
Tssr33727 | 3 | 58 | - | TSS region | transcription start site region 33727 | |
Tssr33728 | 3 | 52 | - | TSS region | transcription start site region 33728 | |
4930589L23Rik | 3 | 4388 | + | lincRNA gene | RIKEN cDNA 4930589L23 gene | |
Tssr29585 | 3 | 10 | + | TSS region | transcription start site region 29585 | |
Tssr33729 | 3 | 48 | - | TSS region | transcription start site region 33729 | |
Tssr33730 | 3 | 15 | - | TSS region | transcription start site region 33730 | |
Gm35067 | 3 | 646 | + | pseudogene | predicted gene, 35067 | |
Cpgi13276 | 3 | 706 | CpG island | CpG island 13276 | ||
Tssr33731 | 3 | 14 | - | TSS region | transcription start site region 33731 | |
Tssr33732 | 3 | 25 | - | TSS region | transcription start site region 33732 | |
Tssr29586 | 3 | 74 | + | TSS region | transcription start site region 29586 | |
Ppid | 3 | 12261 | + | protein coding gene | peptidylprolyl isomerase D (cyclophilin D) | |
Tssr29587 | 3 | 11 | + | TSS region | transcription start site region 29587 | |
Etfdh | 3 | 24979 | - | protein coding gene | electron transferring flavoprotein, dehydrogenase | |
Gm37973 | 3 | 1288 | - | unclassified gene | predicted gene, 37973 | |
Tssr33733 | 3 | 7 | - | TSS region | transcription start site region 33733 | |
Cpgi13277 | 3 | 1196 | CpG island | CpG island 13277 | ||
Tssr33734 | 3 | 11 | - | TSS region | transcription start site region 33734 | |
Tssr33735 | 3 | 85 | - | TSS region | transcription start site region 33735 | |
Tssr33736 | 3 | 11 | - | TSS region | transcription start site region 33736 | |
Tssr33737 | 3 | 11 | - | TSS region | transcription start site region 33737 | |
Tssr33738 | 3 | 1 | - | TSS region | transcription start site region 33738 | |
Tssr29588 | 3 | 41 | + | TSS region | transcription start site region 29588 | |
4930579G24Rik | 3 | 3741 | + | protein coding gene | RIKEN cDNA 4930579G24 gene | |
Tssr29589 | 3 | 17 | + | TSS region | transcription start site region 29589 | |
Tssr29590 | 3 | 37 | + | TSS region | transcription start site region 29590 | |
Rxfp1 | 3 | 96269 | - | protein coding gene | relaxin/insulin-like family peptide receptor 1 | |
Gm26984 | 3 | 3509 | - | sense intronic lncRNA gene | predicted gene, 26984 | |
D3Mit26.2 | 3 | 163 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 26.2 | ||
D3Mit26 | 3 | 149 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 26 | ||
D3Mit244.2 | 3 | 143 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 244.2 | ||
Tssr33739 | 3 | 24 | - | TSS region | transcription start site region 33739 | |
Tssr33740 | 3 | 11 | - | TSS region | transcription start site region 33740 | |
Tssr33741 | 3 | 24 | - | TSS region | transcription start site region 33741 | |
Tssr911 | 3 | 5 | + | TSS region | transcription start site region 911 | |
Tmem144 | 3 | 40209 | - | protein coding gene | transmembrane protein 144 | |
Tssr33742 | 3 | 13 | - | TSS region | transcription start site region 33742 | |
Tssr33743 | 3 | 14 | - | TSS region | transcription start site region 33743 | |
Tssr33744 | 3 | 17 | - | TSS region | transcription start site region 33744 | |
Tssr33745 | 3 | 22 | - | TSS region | transcription start site region 33745 | |
Tssr33746 | 3 | 10 | - | TSS region | transcription start site region 33746 | |
Tssr33747 | 3 | 13 | - | TSS region | transcription start site region 33747 | |
Gm26420 | 3 | 102 | + | snRNA gene | predicted gene, 26420 | |
Cpgi13278 | 3 | 327 | CpG island | CpG island 13278 | ||
Tssr33748 | 3 | 42 | - | TSS region | transcription start site region 33748 | |
Tssr29591 | 3 | 26 | + | TSS region | transcription start site region 29591 | |
Tssr33749 | 3 | 75 | - | TSS region | transcription start site region 33749 | |
Tssr33750 | 3 | 6 | - | TSS region | transcription start site region 33750 | |
Tssr33751 | 3 | 24 | - | TSS region | transcription start site region 33751 | |
Gm40073 | 3 | 3790 | + | lncRNA gene | predicted gene, 40073 | |
Tssr29592 | 3 | 19 | + | TSS region | transcription start site region 29592 | |
Gm36569 | 3 | 27513 | - | antisense lncRNA gene | predicted gene, 36569 | |
Tssr29593 | 3 | 32 | + | TSS region | transcription start site region 29593 | |
Tssr29594 | 3 | 22 | + | TSS region | transcription start site region 29594 | |
Tssr29595 | 3 | 22 | + | TSS region | transcription start site region 29595 | |
D3Mit310 | 3 | 87 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology 310 | ||
Tssr29596 | 3 | 75 | + | TSS region | transcription start site region 29596 | |
Gask1b | 3 | 61747 | + | protein coding gene | golgi associated kinase 1B | |
Tssr29597 | 3 | 16 | + | TSS region | transcription start site region 29597 | |
Tssr29598 | 3 | 66 | + | TSS region | transcription start site region 29598 | |
Tssr29599 | 3 | 13 | + | TSS region | transcription start site region 29599 | |
Tssr29600 | 3 | 16 | + | TSS region | transcription start site region 29600 | |
Tssr29601 | 3 | 14 | + | TSS region | transcription start site region 29601 | |
Tssr29602 | 3 | 53 | + | TSS region | transcription start site region 29602 | |
Tssr29603 | 3 | 24 | + | TSS region | transcription start site region 29603 | |
Cpgi13279 | 3 | 634 | CpG island | CpG island 13279 | ||
Tssr29604 | 3 | 9 | + | TSS region | transcription start site region 29604 | |
Tssr33752 | 3 | 10 | - | TSS region | transcription start site region 33752 | |
Tssr33753 | 3 | 57 | - | TSS region | transcription start site region 33753 | |
Tssr29605 | 3 | 28 | + | TSS region | transcription start site region 29605 | |
Tssr29606 | 3 | 13 | + | TSS region | transcription start site region 29606 | |
Tssr33754 | 3 | 26 | - | TSS region | transcription start site region 33754 | |
Tssr29607 | 3 | 11 | + | TSS region | transcription start site region 29607 | |
Tssr29608 | 3 | 53 | + | TSS region | transcription start site region 29608 | |
Tssr29609 | 3 | 4 | + | TSS region | transcription start site region 29609 | |
Tssr29610 | 3 | 11 | + | TSS region | transcription start site region 29610 | |
Tssr29611 | 3 | 9 | + | TSS region | transcription start site region 29611 | |
Tssr29612 | 3 | 6 | + | TSS region | transcription start site region 29612 | |
Gm40074 | 3 | 41735 | + | lncRNA gene | predicted gene, 40074 | |
Gm19066 | 3 | 1047 | - | pseudogene | predicted gene, 19066 | |
Gm43839 | 3 | 2324 | + | unclassified gene | predicted gene 43839 | |
Gm38295 | 3 | 150 | - | pseudogene | predicted gene, 38295 | |
Gm37892 | 3 | 3106 | - | antisense lncRNA gene | predicted gene, 37892 | |
A330069K06Rik | 3 | 8412 | + | lincRNA gene | RIKEN cDNA A330069K06 gene | |
Gm37971 | 3 | 49472 | - | lincRNA gene | predicted gene, 37971 | |
Tssr29613 | 3 | 4 | + | TSS region | transcription start site region 29613 | |
Gm6706 | 3 | 317 | - | pseudogene | predicted gene 6706 | |
D3Mit359 | 3 | 251 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology-359 | ||
Gria2 | 3 | 120300 | - | protein coding gene | glutamate receptor, ionotropic, AMPA2 (alpha 2) | |
Tssr29614 | 3 | 4 | + | TSS region | transcription start site region 29614 | |
Tssr33755 | 3 | 14 | - | TSS region | transcription start site region 33755 | |
Tssr33756 | 3 | 11 | - | TSS region | transcription start site region 33756 | |
Tssr33757 | 3 | 37 | - | TSS region | transcription start site region 33757 | |
Tssr33758 | 3 | 15 | - | TSS region | transcription start site region 33758 | |
Tssr33759 | 3 | 28 | - | TSS region | transcription start site region 33759 | |
Tssr33760 | 3 | 21 | - | TSS region | transcription start site region 33760 | |
Tssr33761 | 3 | 14 | - | TSS region | transcription start site region 33761 | |
Tssr33762 | 3 | 9 | - | TSS region | transcription start site region 33762 | |
Gm25749 | 3 | 110 | - | miRNA gene | predicted gene, 25749 | |
Tssr33763 | 3 | 2 | - | TSS region | transcription start site region 33763 | |
Tssr33764 | 3 | 16 | - | TSS region | transcription start site region 33764 | |
Cpgi13280 | 3 | 1034 | CpG island | CpG island 13280 | ||
Tssr29615 | 3 | 7 | + | TSS region | transcription start site region 29615 | |
Tssr29616 | 3 | 9 | + | TSS region | transcription start site region 29616 | |
Cpgi13281 | 3 | 658 | CpG island | CpG island 13281 | ||
Tssr33765 | 3 | 11 | - | TSS region | transcription start site region 33765 | |
Tssr33766 | 3 | 13 | - | TSS region | transcription start site region 33766 | |
Tssr33767 | 3 | 11 | - | TSS region | transcription start site region 33767 | |
Tssr33768 | 3 | 21 | - | TSS region | transcription start site region 33768 | |
Tssr33769 | 3 | 51 | - | TSS region | transcription start site region 33769 | |
Tssr33770 | 3 | 25 | - | TSS region | transcription start site region 33770 | |
Tssr33771 | 3 | 51 | - | TSS region | transcription start site region 33771 | |
2900092N11Rik | 3 | 392 | unclassified gene | RIKEN cDNA 2900092N11 gene | ||
Glrb | 3 | 70061 | - | protein coding gene | glycine receptor, beta subunit | |
Tssr33772 | 3 | 19 | - | TSS region | transcription start site region 33772 | |
Gm18545 | 3 | 1900 | + | pseudogene | predicted gene, 18545 | |
Cpgi13282 | 3 | 1168 | CpG island | CpG island 13282 | ||
Tssr33773 | 3 | 124 | - | TSS region | transcription start site region 33773 | |
Gm42468 | 3 | 8667 | + | lincRNA gene | predicted gene 42468 | |
Gm29808 | 3 | 467 | + | pseudogene | predicted gene, 29808 | |
D3Dcr8 | 3 | 95 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 8 | ||
Gm42476 | 3 | 820 | + | lincRNA gene | predicted gene 42476 | |
Cpgi13283 | 3 | 1595 | CpG island | CpG island 13283 | ||
Tssr29617 | 3 | 11 | + | TSS region | transcription start site region 29617 | |
Pdgfc | 3 | 177624 | + | protein coding gene | platelet-derived growth factor, C polypeptide | |
Tssr29618 | 3 | 100 | + | TSS region | transcription start site region 29618 | |
Tssr29619 | 3 | 46 | + | TSS region | transcription start site region 29619 | |
Tssr29620 | 3 | 11 | + | TSS region | transcription start site region 29620 | |
Tssr29621 | 3 | 68 | + | TSS region | transcription start site region 29621 | |
Tssr29622 | 3 | 13 | + | TSS region | transcription start site region 29622 | |
Tssr29623 | 3 | 12 | + | TSS region | transcription start site region 29623 | |
Gm16000 | 3 | 3029 | - | antisense lncRNA gene | predicted gene 16000 | |
D3Mit245 | 3 | 149 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 245 | ||
D3Dcr9 | 3 | 96 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 9 | ||
D3Mit358 | 3 | 114 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology-358 | ||
D3Dcr10 | 3 | 98 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 10 | ||
Tssr29624 | 3 | 8 | + | TSS region | transcription start site region 29624 | |
D3Dcr11 | 3 | 95 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 11 | ||
Gm37300 | 3 | 279 | - | pseudogene | predicted gene, 37300 | |
Gm4857 | 3 | 784 | - | pseudogene | predicted gene 4857 | |
Gm43346 | 3 | 2354 | + | lincRNA gene | predicted gene 43346 | |
A830029E22Rik | 3 | 3136 | + | lincRNA gene | RIKEN cDNA A830029E22 gene | |
Gm22531 | 3 | 139 | + | snoRNA gene | predicted gene, 22531 | |
Gm9989 | 3 | 6455 | - | lncRNA gene | predicted gene 9989 | |
Cpgi13284 | 3 | 274 | CpG island | CpG island 13284 | ||
Ctso | 3 | 24124 | + | protein coding gene | cathepsin O | |
Tssr29625 | 3 | 26 | + | TSS region | transcription start site region 29625 | |
Tssr29626 | 3 | 29 | + | TSS region | transcription start site region 29626 | |
Tssr29627 | 3 | 14 | + | TSS region | transcription start site region 29627 | |
Tdo2 | 3 | 17316 | - | protein coding gene | tryptophan 2,3-dioxygenase | |
Tssr33774 | 3 | 9 | - | TSS region | transcription start site region 33774 | |
Tssr33775 | 3 | 4 | - | TSS region | transcription start site region 33775 | |
Tssr33776 | 3 | 22 | - | TSS region | transcription start site region 33776 | |
Tssr33777 | 3 | 2 | - | TSS region | transcription start site region 33777 | |
Tssr33778 | 3 | 7 | - | TSS region | transcription start site region 33778 | |
Tssr33779 | 3 | 18 | - | TSS region | transcription start site region 33779 | |
Tssr33780 | 3 | 2 | - | TSS region | transcription start site region 33780 | |
Asic5 | 3 | 38940 | + | protein coding gene | acid-sensing (proton-gated) ion channel family member 5 |