MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:78841356-79091799

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm24749	3	78842224 to 78842566	342	+	unclassified non-coding RNA gene	predicted gene, 24749
Gm17953	3	78864897 to 78865563	666	-	pseudogene	predicted gene, 17953
Tssr33612	3	78888457 to 78888458	1	-	TSS region	transcription start site region 33612
Gm5277	3	78891867 to 78892422	555	-	pseudogene	predicted gene 5277
Gm10291	3	78917258 to 78918256	998	+	pseudogene	predicted pseudogene 10291
Gm38542	3	78918459 to 78936306	17847	-	lncRNA gene	predicted gene, 38542
Gm9762	3	78966356 to 78966799	443	-	pseudogene	predicted pseudogene 9762
Cpgi13272	3	78966800 to 78967303	503		CpG island	CpG island 13272
Gm23440	3	78979922 to 78980051	129	+	snoRNA gene	predicted gene, 23440
Tssr29573	3	79028436 to 79028442	6	+	TSS region	transcription start site region 29573
Rapgef2	3	79062516 to 79286517	224001	-	protein coding gene	Rap guanine nucleotide exchange factor (GEF) 2
Tssr33613	3	79063545 to 79063548	3	-	TSS region	transcription start site region 33613
Cpgi13273	3	79066519 to 79066884	365		CpG island	CpG island 13273
Tssr33614	3	79075391 to 79075425	34	-	TSS region	transcription start site region 33614
Tssr33615	3	79076304 to 79076331	27	-	TSS region	transcription start site region 33615
Tssr33616	3	79076590 to 79076599	9	-	TSS region	transcription start site region 33616
Tssr33617	3	79078896 to 79078920	24	-	TSS region	transcription start site region 33617
Tssr33618	3	79082515 to 79082517	2	-	TSS region	transcription start site region 33618
Tssr33619	3	79083596 to 79083616	20	-	TSS region	transcription start site region 33619