Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:54745582-54811257

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alg5 3 54735539 to 54749795 14256 + protein coding gene asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase)
Cpgi13174 3 54754975 to 54756277 1302 CpG island CpG island 13174
Tssr29141 3 54755541 to 54755571 30 + TSS region transcription start site region 29141
Tssr29142 3 54755574 to 54755589 15 + TSS region transcription start site region 29142
Smad9 3 54755582 to 54801257 45675 + protein coding gene SMAD family member 9
Tssr29143 3 54755628 to 54755648 20 + TSS region transcription start site region 29143
Cpgi13175 3 54764483 to 54764740 257 CpG island CpG island 13175
Tssr29144 3 54766483 to 54766486 3 + TSS region transcription start site region 29144
Cpgi13176 3 54782527 to 54782747 220 CpG island CpG island 13176
Cpgi13177 3 54786017 to 54786403 386 CpG island CpG island 13177
D3Mit135.1 3 54791152 to 54791279 127 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 135.1
D3Mit135 3 54791327 to 54791454 127 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 135
Cpgi13178 3 54797380 to 54797774 394 CpG island CpG island 13178
Rfxap 3 54803115 to 54807791 4676 - protein coding gene regulatory factor X-associated protein
Cpgi13179 3 54807046 to 54808397 1351 CpG island CpG island 13179
Tssr33283 3 54807737 to 54807746 9 - TSS region transcription start site region 33283
Tssr33284 3 54807752 to 54807768 16 - TSS region transcription start site region 33284
Tssr33285 3 54807770 to 54807804 34 - TSS region transcription start site region 33285
Tssr33286 3 54807816 to 54807827 11 - TSS region transcription start site region 33286
Gm10254 3 54810384 to 54811250 866 - pseudogene predicted gene 10254
Cpgi13180 3 54811189 to 54811454 265 CpG island CpG island 13180