Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:149466911-151336947

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A630039O03Rik 3 149444227 to 149498001 53774 + lncRNA gene RIKEN cDNA A630039O03 gene
Gm31060 3 149498160 to 149516022 17862 + lncRNA gene predicted gene, 31060
Cpgi13933 3 149519327 to 149519481 154 CpG island CpG island 13933
D3Mit148 3 149522982 to 149523106 124 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 148
D3Dcr20 3 149523550 to 149523659 109 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 20
Gm31121 3 149562882 to 149660394 97512 - lincRNA gene predicted gene, 31121
D3Mit32 3 149748422 to 149748596 174 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 32
Gm31244 3 149907519 to 149938892 31373 + lncRNA gene predicted gene, 31244
Tssr1092 3 149954587 to 149954594 7 + TSS region transcription start site region 1092
Tssr32377 3 150049725 to 150049731 6 + TSS region transcription start site region 32377
Rpsa-ps10 3 150072658 to 150073542 884 - pseudogene ribosomal protein SA, pseudogene 10
Tssr32378 3 150401911 to 150401947 36 + TSS region transcription start site region 32378
Gm40178 3 150401926 to 150408977 7051 + lncRNA gene predicted gene, 40178
Gm6439 3 150515220 to 150516081 861 - pseudogene predicted gene 6439
Cpgi13934 3 150515842 to 150516218 376 CpG island CpG island 13934
Gm43470 3 150588739 to 150612176 23437 + lincRNA gene predicted gene 43470
Tssr32379 3 150588811 to 150588822 11 + TSS region transcription start site region 32379
D3Mit128 3 150756256 to 150756405 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 128
Loco1 3 150756256 to 150756405 149 QTL locomotor activity 1
Mir3963 3 151023792 to 151023862 70 - miRNA gene microRNA 3963
Gm43468 3 151071387 to 151074558 3171 + lincRNA gene predicted gene 43468
Gm43469 3 151092134 to 151096767 4633 - unclassified gene predicted gene 43469
Gm43473 3 151117922 to 151123918 5996 - unclassified gene predicted gene 43473
Tssr164681 3 151198865 to 151198866 1 - TSS region transcription start site region 164681
4930555A03Rik 3 151293853 to 151296307 2454 + lincRNA gene RIKEN cDNA 4930555A03 gene
Tssr32380 3 151294141 to 151294178 37 + TSS region transcription start site region 32380
Tssr32381 3 151294203 to 151294218 15 + TSS region transcription start site region 32381
Tssr32382 3 151294229 to 151294243 14 + TSS region transcription start site region 32382
Tssr1093 3 151294519 to 151294529 10 + TSS region transcription start site region 1093
Tssr1094 3 151294531 to 151294546 15 + TSS region transcription start site region 1094
Gm42949 3 151333349 to 151337638 4289 + lincRNA gene predicted gene 42949