Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:127588538-127788552

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zgrf1 3 127553489 to 127618023 64534 + protein coding gene zinc finger, GRF-type containing 1
Cpgi13793 3 127625264 to 127625709 445 CpG island CpG island 13793
Gm40147 3 127626162 to 127628117 1955 - lncRNA gene predicted gene, 40147
Cpgi13794 3 127626207 to 127626372 165 CpG island CpG island 13794
Cpgi13795 3 127628359 to 127628596 237 CpG island CpG island 13795
Cpgi13796 3 127632276 to 127634817 2541 CpG island CpG island 13796
Tssr31589 3 127632738 to 127632765 27 + TSS region transcription start site region 31589
Tssr31590 3 127632798 to 127632810 12 + TSS region transcription start site region 31590
Tssr31591 3 127633134 to 127633140 6 + TSS region transcription start site region 31591
Neurog2 3 127633145 to 127635631 2486 + protein coding gene neurogenin 2
Tssr31592 3 127633197 to 127633212 15 + TSS region transcription start site region 31592
Cpgi13797 3 127639776 to 127640238 462 CpG island CpG island 13797
Alpk1 3 127670310 to 127780527 110217 - protein coding gene alpha-kinase 1
Tssr35586 3 127688538 to 127688552 14 - TSS region transcription start site region 35586
Tssr35587 3 127690748 to 127690783 35 - TSS region transcription start site region 35587
Tssr35588 3 127691291 to 127691304 13 - TSS region transcription start site region 35588
Gm16238 3 127691935 to 127692520 585 - pseudogene predicted gene 16238
Tssr35589 3 127692546 to 127692548 2 - TSS region transcription start site region 35589
Cpgi13798 3 127695406 to 127695783 377 CpG island CpG island 13798
D3Mit109 3 127696334 to 127696565 231 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 109
1500005C15Rik 3 127714634 to 127717027 2393 - unclassified gene RIKEN cDNA 1500005C15 gene
Gm42587 3 127717206 to 127719186 1980 - unclassified gene predicted gene 42587
Gm23279 3 127731594 to 127731690 96 + rRNA gene predicted gene, 23279
Tssr35590 3 127734128 to 127734136 8 - TSS region transcription start site region 35590
Tssr35591 3 127780030 to 127780040 10 - TSS region transcription start site region 35591
Cpgi13799 3 127780171 to 127780544 373 CpG island CpG island 13799
Tssr35592 3 127780194 to 127780222 28 - TSS region transcription start site region 35592
Tssr35593 3 127780226 to 127780238 12 - TSS region transcription start site region 35593
Tssr35594 3 127780250 to 127780288 38 - TSS region transcription start site region 35594
Tssr35595 3 127780309 to 127780338 29 - TSS region transcription start site region 35595
Tssr35596 3 127780385 to 127780396 11 - TSS region transcription start site region 35596
Tssr35597 3 127780461 to 127780529 68 - TSS region transcription start site region 35597
Tssr31593 3 127780644 to 127780653 9 + TSS region transcription start site region 31593