Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:92985942-93198244

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prdm11 2 92974906 to 93046144 71238 - protein coding gene PR domain containing 11
Cpgi11939 2 93014274 to 93015789 1515 CpG island CpG island 11939
Tssr25273 2 93014573 to 93014598 25 - TSS region transcription start site region 25273
Tssr25274 2 93014601 to 93014636 35 - TSS region transcription start site region 25274
Gm46753 2 93026612 to 93045703 19091 - lncRNA gene predicted gene, 46753
Tssr18973 2 93027943 to 93027957 14 + TSS region transcription start site region 18973
4631405J19Rik 2 93029348 to 93033445 4097 + antisense lncRNA gene RIKEN cDNA 4631405J19 gene
Tssr18974 2 93030363 to 93030372 9 + TSS region transcription start site region 18974
Tssr18975 2 93030373 to 93030416 43 + TSS region transcription start site region 18975
Tssr18976 2 93030423 to 93030445 22 + TSS region transcription start site region 18976
Tssr25275 2 93037236 to 93037259 23 - TSS region transcription start site region 25275
Cpgi11940 2 93045250 to 93046723 1473 CpG island CpG island 11940
Tssr25276 2 93046140 to 93046172 32 - TSS region transcription start site region 25276
Tssr25277 2 93046262 to 93046298 36 - TSS region transcription start site region 25277
Tssr25278 2 93046430 to 93046465 35 - TSS region transcription start site region 25278
Gm13802 2 93085942 to 93098244 12302 - lincRNA gene predicted gene 13802
Gm32627 2 93144194 to 93152892 8698 + lncRNA gene predicted gene, 32627
1700055L01Rik 2 93146228 to 93149249 3021 + lncRNA gene RIKEN cDNA 1700055L01 gene
Tssr25279 2 93162935 to 93162951 16 - TSS region transcription start site region 25279
Cpgi11941 2 93177742 to 93177993 251 CpG island CpG island 11941
Gm32683 2 93178001 to 93185432 7431 + lncRNA gene predicted gene, 32683
Cpgi11942 2 93180142 to 93180788 646 CpG island CpG island 11942
Tssr18977 2 93181251 to 93181259 8 + TSS region transcription start site region 18977
Tssr18978 2 93186799 to 93186808 9 + TSS region transcription start site region 18978
Cpgi11943 2 93187261 to 93188994 1733 CpG island CpG island 11943
Tssr18979 2 93187542 to 93187553 11 + TSS region transcription start site region 18979
Trp53i11 2 93187548 to 93201759 14211 + protein coding gene transformation related protein 53 inducible protein 11
Tssr18980 2 93187559 to 93187570 11 + TSS region transcription start site region 18980
Tssr18981 2 93187574 to 93187641 67 + TSS region transcription start site region 18981
Tssr18982 2 93187772 to 93187783 11 + TSS region transcription start site region 18982
C230071H18Rik 2 93190906 to 93193424 2518 unclassified gene RIKEN cDNA C230071H18 gene
Tssr18983 2 93191111 to 93191117 6 + TSS region transcription start site region 18983
Tssr18984 2 93192406 to 93192420 14 + TSS region transcription start site region 18984