Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:6171284-6341288

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Echdc3 2 6188465 to 6212994 24529 - protein coding gene enoyl Coenzyme A hydratase domain containing 3
A230108P19Rik 2 6193251 to 6321611 128360 + antisense lncRNA gene RIKEN cDNA A230108P19 gene
Gm30185 2 6208596 to 6211567 2971 - lncRNA gene predicted gene, 30185
Tssr16018 2 6209863 to 6209866 3 + TSS region transcription start site region 16018
Tssr22440 2 6212973 to 6212977 4 - TSS region transcription start site region 22440
Tssr22441 2 6212980 to 6213002 22 - TSS region transcription start site region 22441
Tssr22442 2 6213035 to 6213044 9 - TSS region transcription start site region 22442
Gm13383 2 6255946 to 6257266 1320 - lincRNA gene predicted gene 13383
Tssr22443 2 6256284 to 6256288 4 - TSS region transcription start site region 22443
Gm46730 2 6256838 to 6260737 3899 + lncRNA gene predicted gene, 46730
Tssr16019 2 6294343 to 6294349 6 + TSS region transcription start site region 16019
Cpgi11176 2 6321938 to 6323573 1635 CpG island CpG island 11176
1700014B07Rik 2 6322262 to 6323079 817 protein coding gene RIKEN cDNA 1700014B07 gene
Tssr16020 2 6322621 to 6322647 26 + TSS region transcription start site region 16020
Usp6nl 2 6322667 to 6446390 123723 + protein coding gene USP6 N-terminal like
Tssr16021 2 6322751 to 6322783 32 + TSS region transcription start site region 16021
Tssr16022 2 6322786 to 6322860 74 + TSS region transcription start site region 16022
Tssr22444 2 6323074 to 6323096 22 - TSS region transcription start site region 22444
Tssr22445 2 6323155 to 6323171 16 - TSS region transcription start site region 22445
Tssr16023 2 6341020 to 6341031 11 + TSS region transcription start site region 16023