Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:4497087-4807140

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Frmd4a 2 4017717 to 4614043 596326 + protein coding gene FERM domain containing 4A
Gm39751 2 4473223 to 4510570 37347 - lncRNA gene predicted gene, 39751
Cpgi11157 2 4559540 to 4560044 504 CpG island CpG island 11157
Tssr15962 2 4559602 to 4559629 27 + TSS region transcription start site region 15962
Tssr15963 2 4559645 to 4559656 11 + TSS region transcription start site region 15963
Tssr22384 2 4559671 to 4559694 23 - TSS region transcription start site region 22384
Tssr15964 2 4559701 to 4559706 5 + TSS region transcription start site region 15964
Tssr15965 2 4559742 to 4559755 13 + TSS region transcription start site region 15965
Tssr15966 2 4559759 to 4559810 51 + TSS region transcription start site region 15966
Tssr15967 2 4559878 to 4559892 14 + TSS region transcription start site region 15967
Tssr15968 2 4559913 to 4559930 17 + TSS region transcription start site region 15968
Tssr15969 2 4559931 to 4559943 12 + TSS region transcription start site region 15969
Tssr15970 2 4560050 to 4560063 13 + TSS region transcription start site region 15970
Tssr15971 2 4560118 to 4560148 30 + TSS region transcription start site region 15971
D2Mit426 2 4561924 to 4562098 174 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 426
Gm13179 2 4586024 to 4587287 1263 - antisense lncRNA gene predicted gene 13179
Tssr22385 2 4593535 to 4593570 35 - TSS region transcription start site region 22385
Tssr15972 2 4597266 to 4597291 25 + TSS region transcription start site region 15972
D2Mit355 2 4598040 to 4598186 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 355
Cpgi11158 2 4603390 to 4604315 925 CpG island CpG island 11158
Prpf18 2 4622058 to 4652113 30055 - protein coding gene pre-mRNA processing factor 18
Cpgi11159 2 4651579 to 4652248 669 CpG island CpG island 11159
Tssr22386 2 4652060 to 4652077 17 - TSS region transcription start site region 22386
Tssr22387 2 4652087 to 4652140 53 - TSS region transcription start site region 22387
Tssr15973 2 4700221 to 4700232 11 + TSS region transcription start site region 15973
Gm13196 2 4700238 to 4700616 378 + pseudogene predicted gene 13196
D2Ertd623e 2 4704666 to 4704879 213 DNA segment DNA segment, Chr 2, ERATO Doi 623, expressed
Cpgi11160 2 4717285 to 4718673 1388 CpG island CpG island 11160
Tssr15974 2 4717825 to 4717893 68 + TSS region transcription start site region 15974
Bend7 2 4717831 to 4802142 84311 + protein coding gene BEN domain containing 7
Tssr15975 2 4718191 to 4718205 14 + TSS region transcription start site region 15975
Tssr15976 2 4739316 to 4739320 4 + TSS region transcription start site region 15976