Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:3968110-4390661

Filter by:
41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr390 2 4017685 to 4017696 11 + TSS region transcription start site region 390
Tssr15926 2 4017706 to 4017722 16 + TSS region transcription start site region 15926
Frmd4a 2 4017717 to 4614043 596326 + protein coding gene FERM domain containing 4A
Tssr15927 2 4017727 to 4017745 18 + TSS region transcription start site region 15927
Tssr15928 2 4017757 to 4017768 11 + TSS region transcription start site region 15928
Gm2639 2 4051263 to 4052559 1296 - pseudogene predicted gene 2639
Tssr15929 2 4057908 to 4057919 11 + TSS region transcription start site region 15929
Tssr15930 2 4058104 to 4058134 30 + TSS region transcription start site region 15930
Gm13188 2 4081855 to 4082418 563 - pseudogene predicted gene 13188
Gm10862 2 4091140 to 4094489 3349 + sense intronic lncRNA gene predicted gene 10862
Gm38085 2 4103877 to 4106938 3061 + sense intronic lncRNA gene predicted gene, 38085
Tssr15931 2 4131659 to 4131664 5 + TSS region transcription start site region 15931
1700080N15Rik 2 4132065 to 4141141 9076 - antisense lncRNA gene RIKEN cDNA 1700080N15 gene
Gm13189 2 4137774 to 4144102 6328 + lincRNA gene predicted gene 13189
Gm37814 2 4138984 to 4142627 3643 + sense intronic lncRNA gene predicted gene, 37814
Tssr22383 2 4141128 to 4141146 18 - TSS region transcription start site region 22383
Tssr15932 2 4141270 to 4141281 11 + TSS region transcription start site region 15932
Tssr15933 2 4152588 to 4152610 22 + TSS region transcription start site region 15933
Tssr15934 2 4152615 to 4152644 29 + TSS region transcription start site region 15934
Tssr15935 2 4165964 to 4165969 5 + TSS region transcription start site region 15935
Gm37107 2 4178110 to 4180661 2551 + sense intronic lncRNA gene predicted gene, 37107
Gm38348 2 4217081 to 4219353 2272 + sense intronic lncRNA gene predicted gene, 38348
Tssr15936 2 4218167 to 4218170 3 + TSS region transcription start site region 15936
Gm39752 2 4247426 to 4250592 3166 + lncRNA gene predicted gene, 39752
Tssr15937 2 4285236 to 4285253 17 + TSS region transcription start site region 15937
Gm13187 2 4289345 to 4301144 11799 - lncRNA gene predicted gene 13187
Tssr15938 2 4300462 to 4300522 60 + TSS region transcription start site region 15938
Tssr15939 2 4300537 to 4300568 31 + TSS region transcription start site region 15939
Tssr15940 2 4300590 to 4300599 9 + TSS region transcription start site region 15940
Tssr15941 2 4300604 to 4300617 13 + TSS region transcription start site region 15941
Tssr15942 2 4300623 to 4300635 12 + TSS region transcription start site region 15942
Tssr15943 2 4300727 to 4300741 14 + TSS region transcription start site region 15943
Tssr15944 2 4300749 to 4300765 16 + TSS region transcription start site region 15944
Tssr15945 2 4300773 to 4300797 24 + TSS region transcription start site region 15945
Tssr15946 2 4300877 to 4300904 27 + TSS region transcription start site region 15946
Tssr15947 2 4300908 to 4300931 23 + TSS region transcription start site region 15947
Gm36988 2 4316479 to 4318886 2407 + sense intronic lncRNA gene predicted gene, 36988
Gm23691 2 4380961 to 4381067 106 - snRNA gene predicted gene, 23691
Tssr15948 2 4389455 to 4389467 12 + TSS region transcription start site region 15948
Tssr15949 2 4389594 to 4389602 8 + TSS region transcription start site region 15949
Tssr15950 2 4389615 to 4389639 24 + TSS region transcription start site region 15950