Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:3438103-3558108

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dclre1c 2 3424131 to 3464130 39999 + protein coding gene DNA cross-link repair 1C
Tssr15891 2 3439309 to 3439330 21 + TSS region transcription start site region 15891
Tssr15892 2 3441032 to 3441044 12 + TSS region transcription start site region 15892
Tssr15893 2 3442473 to 3442510 37 + TSS region transcription start site region 15893
Tssr15894 2 3453700 to 3453716 16 + TSS region transcription start site region 15894
Suv39h2 2 3455815 to 3474986 19171 - protein coding gene suppressor of variegation 3-9 2
Tssr15895 2 3461602 to 3461649 47 + TSS region transcription start site region 15895
Tssr15896 2 3468588 to 3468613 25 + TSS region transcription start site region 15896
Gm13184 2 3468613 to 3474546 5933 + antisense lncRNA gene predicted gene 13184
Cpgi11153 2 3474284 to 3475366 1082 CpG island CpG island 11153
Tssr22368 2 3474954 to 3474975 21 - TSS region transcription start site region 22368
Tssr22369 2 3474989 to 3475004 15 - TSS region transcription start site region 22369
Tssr22370 2 3475027 to 3475086 59 - TSS region transcription start site region 22370
Tssr15897 2 3475172 to 3475186 14 + TSS region transcription start site region 15897
Hspa14 2 3488850 to 3512814 23964 - protein coding gene heat shock protein 14
Tssr22371 2 3498103 to 3498108 5 - TSS region transcription start site region 22371
Gm45902 2 3504527 to 3512790 8263 - protein coding gene predicted gene 45902
Tssr22372 2 3511212 to 3511243 31 - TSS region transcription start site region 22372
Cpgi11154 2 3512161 to 3513402 1241 CpG island CpG island 11154
Tssr22373 2 3512746 to 3512782 36 - TSS region transcription start site region 22373
Tssr22374 2 3512929 to 3512970 41 - TSS region transcription start site region 22374
Cdnf 2 3513030 to 3526376 13346 + protein coding gene cerebral dopamine neurotrophic factor
Tssr15898 2 3513035 to 3513074 39 + TSS region transcription start site region 15898
Tssr15899 2 3513092 to 3513127 35 + TSS region transcription start site region 15899
Tssr22375 2 3517790 to 3517796 6 - TSS region transcription start site region 22375
Gm13186 2 3531285 to 3531600 315 + pseudogene predicted gene 13186
Gm13182 2 3550757 to 3551068 311 + pseudogene predicted gene 13182