Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:26918416-27064628

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Surf2 2 26916365 to 26920172 3807 + protein coding gene surfeit gene 2
Surf4 2 26920041 to 26933776 13735 - protein coding gene surfeit gene 4
Gm36591 2 26928248 to 26933268 5020 - lncRNA gene predicted gene, 36591
Cpgi11363 2 26932609 to 26934247 1638 CpG island CpG island 11363
Tssr23167 2 26933332 to 26933349 17 - TSS region transcription start site region 23167
Tssr23168 2 26933355 to 26933396 41 - TSS region transcription start site region 23168
Tssr23169 2 26933403 to 26933467 64 - TSS region transcription start site region 23169
Tssr440 2 26933628 to 26933637 9 + TSS region transcription start site region 440
Tssr16829 2 26934028 to 26934084 56 + TSS region transcription start site region 16829
Stkld1 2 26934047 to 26953496 19449 + protein coding gene serine/threonine kinase-like domain containing 1
Gm39775 2 26949199 to 26952664 3465 - lncRNA gene predicted gene, 39775
Rexo4 2 26953563 to 26964386 10823 - protein coding gene REX4, 3'-5' exonuclease
Cpgi11364 2 26963987 to 26964775 788 CpG island CpG island 11364
Tssr23170 2 26964277 to 26964363 86 - TSS region transcription start site region 23170
Gm36649 2 26970009 to 26975684 5675 - lncRNA gene predicted gene, 36649
Adamts13 2 26973416 to 27009628 36212 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
Tssr16830 2 26973468 to 26973479 11 + TSS region transcription start site region 16830
Tssr16831 2 26973482 to 26973505 23 + TSS region transcription start site region 16831
Tssr441 2 26974007 to 26974024 17 - TSS region transcription start site region 441
Tssr16832 2 27006592 to 27006604 12 + TSS region transcription start site region 16832
Cpgi11365 2 27009771 to 27010565 794 CpG island CpG island 11365
Cacfd1 2 27009926 to 27021089 11163 + protein coding gene calcium channel flower domain containing 1
Tssr16833 2 27009932 to 27009935 3 + TSS region transcription start site region 16833
Tssr16834 2 27009936 to 27009993 57 + TSS region transcription start site region 16834
Tssr23171 2 27019931 to 27019953 22 - TSS region transcription start site region 23171
Tssr23172 2 27019978 to 27019993 15 - TSS region transcription start site region 23172
Tssr23173 2 27019997 to 27020017 20 - TSS region transcription start site region 23173
Tssr23174 2 27020046 to 27020061 15 - TSS region transcription start site region 23174
Tssr23175 2 27020068 to 27020077 9 - TSS region transcription start site region 23175
Slc2a6 2 27021363 to 27027998 6635 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 6
Tssr23176 2 27021885 to 27021896 11 - TSS region transcription start site region 23176
Tssr23177 2 27024299 to 27024321 22 - TSS region transcription start site region 23177
Tssr16835 2 27025792 to 27025840 48 + TSS region transcription start site region 16835
Tssr23178 2 27027271 to 27027288 17 - TSS region transcription start site region 23178
Cpgi11366 2 27027772 to 27028270 498 CpG island CpG island 11366
Tssr23179 2 27027916 to 27027995 79 - TSS region transcription start site region 23179
Tssr16836 2 27034657 to 27034668 11 + TSS region transcription start site region 16836
Gm13397 2 27034680 to 27035554 874 + pseudogene predicted gene 13397
Gm13398 2 27037285 to 27040853 3568 + antisense lncRNA gene predicted gene 13398
Tssr442 2 27037719 to 27037720 1 + TSS region transcription start site region 442
Mymk 2 27061636 to 27072161 10525 - protein coding gene myomaker, myoblast fusion factor