MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:180054443-180154454

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ss18l1	2	180042509 to 180070201	27692	+	protein coding gene	SS18, nBAF chromatin remodeling complex subunit like 1
Cpgi12883	2	180070324 to 180071231	907		CpG island	CpG island 12883
Tssr22207	2	180070576 to 180070611	35	+	TSS region	transcription start site region 22207
Mtg2	2	180070593 to 180085902	15309	+	protein coding gene	mitochondrial ribosome associated GTPase 2
Hrh3	2	180099465 to 180104407	4942	-	protein coding gene	histamine receptor H3
Tssr22208	2	180099838 to 180099847	9	+	TSS region	transcription start site region 22208
Gm17180	2	180099913 to 180101502	1589	+	antisense lncRNA gene	predicted gene 17180
Cpgi12884	2	180100559 to 180100890	331		CpG island	CpG island 12884
Cpgi12885	2	180103069 to 180105244	2175		CpG island	CpG island 12885
Tssr801	2	180104400 to 180104426	26	-	TSS region	transcription start site region 801
Tssr28077	2	180104443 to 180104454	11	-	TSS region	transcription start site region 28077
Tssr28078	2	180104463 to 180104478	15	-	TSS region	transcription start site region 28078
Gm46782	2	180104738 to 180110751	6013	-	lncRNA gene	predicted gene, 46782
Cpgi12886	2	180118828 to 180120172	1344		CpG island	CpG island 12886
Tssr22209	2	180119301 to 180119407	106	+	TSS region	transcription start site region 22209
Osbpl2	2	180119366 to 180162682	43316	+	protein coding gene	oxysterol binding protein-like 2
Tssr22210	2	180120643 to 180120648	5	+	TSS region	transcription start site region 22210
Gm29886	2	180149659 to 180171871	22212	-	lncRNA gene	predicted gene, 29886