Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:172230473-172352753

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12816 2 172248240 to 172248546 306 CpG island CpG island 12816
Mc3r 2 172248492 to 172251114 2622 + protein coding gene melanocortin 3 receptor
Cpgi12817 2 172249158 to 172249980 822 CpG island CpG island 12817
Gm40007 2 172263129 to 172276213 13084 - lncRNA gene predicted gene, 40007
Gm40008 2 172285473 to 172297753 12280 - lncRNA gene predicted gene, 40008
Tssr21941 2 172287977 to 172288014 37 + TSS region transcription start site region 21941
Tssr21942 2 172288120 to 172288137 17 + TSS region transcription start site region 21942
Gm14275 2 172288133 to 172290520 2387 + lincRNA gene predicted gene 14275
Tssr21943 2 172288145 to 172288159 14 + TSS region transcription start site region 21943
Gm14273 2 172324334 to 172338663 14329 + antisense lncRNA gene predicted gene 14273
Cpgi12818 2 172329300 to 172329536 236 CpG island CpG island 12818
Cpgi12819 2 172345315 to 172346383 1068 CpG island CpG island 12819
Fam210b 2 172345570 to 172355749 10179 + protein coding gene family with sequence similarity 210, member B
Tssr21944 2 172345579 to 172345590 11 + TSS region transcription start site region 21944
Tssr21945 2 172345595 to 172345626 31 + TSS region transcription start site region 21945
Tssr21946 2 172345628 to 172345647 19 + TSS region transcription start site region 21946
Tssr27939 2 172345670 to 172345683 13 - TSS region transcription start site region 27939