Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:156742882-157043118

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlgap4 2 156613705 to 156764363 150658 + protein coding gene DLG associated protein 4
Tssr21199 2 156743768 to 156743773 5 + TSS region transcription start site region 21199
Tssr21200 2 156745825 to 156745841 16 + TSS region transcription start site region 21200
Tssr21201 2 156749159 to 156749205 46 + TSS region transcription start site region 21201
Tssr718 2 156755347 to 156755350 3 + TSS region transcription start site region 718
Tssr21202 2 156775163 to 156775209 46 + TSS region transcription start site region 21202
Cpgi12558 2 156775348 to 156775544 196 CpG island CpG island 12558
Tssr21203 2 156775391 to 156775402 11 + TSS region transcription start site region 21203
Tssr21204 2 156775409 to 156775432 23 + TSS region transcription start site region 21204
Myl9 2 156775420 to 156781658 6238 + protein coding gene myosin, light polypeptide 9, regulatory
Tssr21205 2 156775443 to 156775469 26 + TSS region transcription start site region 21205
Tssr27057 2 156780515 to 156780523 8 - TSS region transcription start site region 27057
Tssr21206 2 156780522 to 156780534 12 + TSS region transcription start site region 21206
Cpgi12559 2 156780938 to 156781313 375 CpG island CpG island 12559
Tssr21207 2 156781144 to 156781237 93 + TSS region transcription start site region 21207
Tssr27058 2 156781183 to 156781194 11 - TSS region transcription start site region 27058
Tssr27059 2 156781577 to 156781593 16 - TSS region transcription start site region 27059
Gm14231 2 156789812 to 156790403 591 - pseudogene predicted gene 14231
Gm14230 2 156833049 to 156839892 6843 - lincRNA gene predicted gene 14230
D2Ertd92e 2 156836223 to 156836427 204 DNA segment DNA segment, Chr 2, ERATO Doi 92, expressed
Cpgi12560 2 156839242 to 156841938 2696 CpG island CpG island 12560
Tssr27060 2 156839738 to 156839759 21 - TSS region transcription start site region 27060
Tssr27061 2 156839790 to 156839858 68 - TSS region transcription start site region 27061
Tssr21208 2 156839815 to 156839826 11 + TSS region transcription start site region 21208
Tgif2 2 156840007 to 156855570 15563 + protein coding gene TGFB-induced factor homeobox 2
Tssr21209 2 156840021 to 156840032 11 + TSS region transcription start site region 21209
Tssr21210 2 156840081 to 156840141 60 + TSS region transcription start site region 21210
Tssr21211 2 156840153 to 156840164 11 + TSS region transcription start site region 21211
Tssr21212 2 156840699 to 156840740 41 + TSS region transcription start site region 21212
Tssr21213 2 156840960 to 156840986 26 + TSS region transcription start site region 21213
Tssr21214 2 156840991 to 156841017 26 + TSS region transcription start site region 21214
Gm37790 2 156846370 to 156849715 3345 - unclassified gene predicted gene, 37790
5430405H02Rik 2 156852403 to 156862945 10542 - lncRNA gene RIKEN cDNA 5430405H02 gene
4930518I15Rik 2 156856616 to 156857946 1330 - unclassified gene RIKEN cDNA 4930518I15 gene
Tssr27062 2 156857125 to 156857134 9 - TSS region transcription start site region 27062
Gm27651 2 156860305 to 156860550 245 + unclassified non-coding RNA gene predicted gene, 27651
Cpgi12561 2 156862613 to 156863883 1270 CpG island CpG island 12561
Tssr27063 2 156862757 to 156862795 38 - TSS region transcription start site region 27063
Tssr27064 2 156862830 to 156862855 25 - TSS region transcription start site region 27064
Tssr27065 2 156862917 to 156862964 47 - TSS region transcription start site region 27065
Tssr27066 2 156862965 to 156863006 41 - TSS region transcription start site region 27066
Tssr21215 2 156863110 to 156863170 60 + TSS region transcription start site region 21215
Rab5if 2 156863128 to 156873563 10435 + protein coding gene RAB5 interacting factor
Tssr21216 2 156863175 to 156863186 11 + TSS region transcription start site region 21216
Sla2 2 156872457 to 156887192 14735 - protein coding gene Src-like-adaptor 2
Tssr21217 2 156872498 to 156872514 16 + TSS region transcription start site region 21217
Tssr27067 2 156881259 to 156881268 9 - TSS region transcription start site region 27067
Tssr27068 2 156887056 to 156887084 28 - TSS region transcription start site region 27068
Tssr27069 2 156887172 to 156887225 53 - TSS region transcription start site region 27069
Tssr27070 2 156887231 to 156887240 9 - TSS region transcription start site region 27070
Gm14248 2 156889464 to 156890007 543 + pseudogene predicted gene 14248
Tssr21218 2 156889520 to 156889540 20 + TSS region transcription start site region 21218
Gm14247 2 156892882 to 156893118 236 - pseudogene predicted gene 14247
Gm14278 2 156912223 to 156915381 3158 - pseudogene predicted gene 14278
Ndrg3 2 156927345 to 156992056 64711 - protein coding gene N-myc downstream regulated gene 3
Tssr27071 2 156928047 to 156928084 37 - TSS region transcription start site region 27071
Tssr27072 2 156928603 to 156928619 16 - TSS region transcription start site region 27072
Tssr27073 2 156928685 to 156928702 17 - TSS region transcription start site region 27073
Tssr27074 2 156943423 to 156943426 3 - TSS region transcription start site region 27074
Tssr27075 2 156953354 to 156953361 7 - TSS region transcription start site region 27075
Tssr27076 2 156953363 to 156953378 15 - TSS region transcription start site region 27076
Tssr27077 2 156953387 to 156953404 17 - TSS region transcription start site region 27077
Gm27653 2 156964158 to 156964293 135 - snoRNA gene predicted gene, 27653
Tssr27078 2 156970280 to 156970293 13 - TSS region transcription start site region 27078
Tssr27079 2 156970405 to 156970418 13 - TSS region transcription start site region 27079
Tssr27080 2 156970484 to 156970494 10 - TSS region transcription start site region 27080
Tssr27081 2 156970502 to 156970520 18 - TSS region transcription start site region 27081
Tssr27082 2 156970553 to 156970573 20 - TSS region transcription start site region 27082
A830037D11Rik 2 156983496 to 156984795 1299 unclassified gene RIKEN cDNA A830037D11 gene
Cpgi12562 2 156991492 to 156992292 800 CpG island CpG island 12562
Tssr27083 2 156991806 to 156991835 29 - TSS region transcription start site region 27083
Tssr27084 2 156991838 to 156991847 9 - TSS region transcription start site region 27084
Tssr27085 2 156991987 to 156992005 18 - TSS region transcription start site region 27085
Tssr27086 2 156992021 to 156992119 98 - TSS region transcription start site region 27086
Gm14276 2 156994173 to 156994892 719 - pseudogene predicted gene 14276
Dsn1 2 156995265 to 157007154 11889 - protein coding gene DSN1 homolog, MIS12 kinetochore complex component
Cpgi12563 2 157006533 to 157007613 1080 CpG island CpG island 12563
Tssr27087 2 157006846 to 157006892 46 - TSS region transcription start site region 27087
Tssr27088 2 157007015 to 157007038 23 - TSS region transcription start site region 27088
Tssr27089 2 157007039 to 157007082 43 - TSS region transcription start site region 27089
Soga1 2 157015799 to 157079254 63455 - protein coding gene suppressor of glucose, autophagy associated 1
Tssr27090 2 157017531 to 157017535 4 - TSS region transcription start site region 27090
Cpgi12564 2 157020592 to 157021394 802 CpG island CpG island 12564
Tssr27091 2 157026033 to 157026037 4 - TSS region transcription start site region 27091
Tssr27092 2 157027749 to 157027758 9 - TSS region transcription start site region 27092
Tssr27093 2 157027793 to 157027804 11 - TSS region transcription start site region 27093
Cpgi12565 2 157039916 to 157040904 988 CpG island CpG island 12565