Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:15673293-17203319

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Malrd1 2 15526479 to 16255555 729076 + protein coding gene MAM and LDL receptor class A domain containing 1
D2Mit316 2 15904967 to 15905087 120 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 316
Gm6587 2 15956958 to 15957512 554 + pseudogene predicted gene 6587
Gm37416 2 16023108 to 16023425 317 - protein coding gene predicted gene, 37416
D2Mit150 2 16154640 to 16154785 145 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 150
Gm13319 2 16268362 to 16270791 2429 - pseudogene predicted gene 13319
D2Mit361 2 16293732 to 16293869 137 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 361
Tssr16298 2 16355637 to 16355656 19 + TSS region transcription start site region 16298
Cpgi11224 2 16355779 to 16357225 1446 CpG island CpG island 11224
Tssr16299 2 16356010 to 16356021 11 + TSS region transcription start site region 16299
Tssr16300 2 16356035 to 16356053 18 + TSS region transcription start site region 16300
Tssr16301 2 16356080 to 16356083 3 + TSS region transcription start site region 16301
Tssr16302 2 16356087 to 16356099 12 + TSS region transcription start site region 16302
Tssr16303 2 16356274 to 16356291 17 + TSS region transcription start site region 16303
Tssr16304 2 16356294 to 16356316 22 + TSS region transcription start site region 16304
Plxdc2 2 16356304 to 16755839 399535 + protein coding gene plexin domain containing 2
Tssr16305 2 16356323 to 16356357 34 + TSS region transcription start site region 16305
Tssr16306 2 16356365 to 16356387 22 + TSS region transcription start site region 16306
Tssr16307 2 16356450 to 16356486 36 + TSS region transcription start site region 16307
Tssr16308 2 16356581 to 16356615 34 + TSS region transcription start site region 16308
Tssr16309 2 16356625 to 16356670 45 + TSS region transcription start site region 16309
Tssr16310 2 16356676 to 16356704 28 + TSS region transcription start site region 16310
Tssr16311 2 16356719 to 16356742 23 + TSS region transcription start site region 16311
Tssr16312 2 16356744 to 16356795 51 + TSS region transcription start site region 16312
Tssr16313 2 16360990 to 16361040 50 + TSS region transcription start site region 16313
Tssr16314 2 16361413 to 16361420 7 + TSS region transcription start site region 16314
Tssr16315 2 16362436 to 16362440 4 + TSS region transcription start site region 16315
Tssr16316 2 16363514 to 16363535 21 + TSS region transcription start site region 16316
Tssr16317 2 16384624 to 16384636 12 + TSS region transcription start site region 16317
Tssr16318 2 16384664 to 16384685 21 + TSS region transcription start site region 16318
Tssr16319 2 16396577 to 16396597 20 + TSS region transcription start site region 16319
Tssr16320 2 16401652 to 16401663 11 + TSS region transcription start site region 16320
Tssr16321 2 16401678 to 16401706 28 + TSS region transcription start site region 16321
Tssr16322 2 16401725 to 16401779 54 + TSS region transcription start site region 16322
Tssr16323 2 16402026 to 16402040 14 + TSS region transcription start site region 16323
Tssr16324 2 16404158 to 16404162 4 + TSS region transcription start site region 16324
Tssr16325 2 16408528 to 16408540 12 + TSS region transcription start site region 16325
Tssr16326 2 16408547 to 16408564 17 + TSS region transcription start site region 16326
Tssr16327 2 16408691 to 16408715 24 + TSS region transcription start site region 16327
Tssr16328 2 16410550 to 16410566 16 + TSS region transcription start site region 16328
Tssr16329 2 16424517 to 16424522 5 + TSS region transcription start site region 16329
Tssr16330 2 16431735 to 16431752 17 + TSS region transcription start site region 16330
Tssr16331 2 16438293 to 16438319 26 + TSS region transcription start site region 16331
Tssr16332 2 16457336 to 16457347 11 + TSS region transcription start site region 16332
Tssr16333 2 16458859 to 16458908 49 + TSS region transcription start site region 16333
Tssr16334 2 16463844 to 16463856 12 + TSS region transcription start site region 16334
Tssr16335 2 16512152 to 16512164 12 + TSS region transcription start site region 16335
Tssr16336 2 16532052 to 16532079 27 + TSS region transcription start site region 16336
Tssr16337 2 16548737 to 16548755 18 + TSS region transcription start site region 16337
Tssr16338 2 16548928 to 16548953 25 + TSS region transcription start site region 16338
Tssr16339 2 16565402 to 16565409 7 + TSS region transcription start site region 16339
Tssr16340 2 16568520 to 16568550 30 + TSS region transcription start site region 16340
Tssr22741 2 16571860 to 16571870 10 - TSS region transcription start site region 22741
Tssr16341 2 16650178 to 16650190 12 + TSS region transcription start site region 16341
Tssr16342 2 16657415 to 16657420 5 + TSS region transcription start site region 16342
Tssr16343 2 16660820 to 16660837 17 + TSS region transcription start site region 16343
Tssr16344 2 16675231 to 16675266 35 + TSS region transcription start site region 16344
Tssr16345 2 16675302 to 16675306 4 + TSS region transcription start site region 16345
9930032E11Rik 2 16692247 to 16695625 3378 unclassified gene RIKEN cDNA 9930032E11 gene
Tssr22742 2 16712119 to 16712159 40 - TSS region transcription start site region 22742
Tssr16346 2 16729283 to 16729295 12 + TSS region transcription start site region 16346
Tssr16347 2 16751197 to 16751208 11 + TSS region transcription start site region 16347
Tssr16348 2 16751278 to 16751296 18 + TSS region transcription start site region 16348
Tssr16349 2 16751385 to 16751404 19 + TSS region transcription start site region 16349
Tssr16350 2 16755317 to 16755329 12 + TSS region transcription start site region 16350
Tssr16351 2 16758938 to 16758973 35 + TSS region transcription start site region 16351
Tssr16352 2 16776654 to 16776657 3 + TSS region transcription start site region 16352
4930515L03Rik 2 16918678 to 17013726 95048 - lncRNA gene RIKEN cDNA 4930515L03 gene
Gm24933 2 16959909 to 16960018 109 - miRNA gene predicted gene, 24933
Gm13326 2 16978821 to 16979831 1010 - pseudogene predicted gene 13326
2900073N21Rik 2 17017681 to 17018645 964 unclassified gene RIKEN cDNA 2900073N21 gene
Gm33002 2 17061614 to 17166869 105255 - lncRNA gene predicted gene, 33002
Gm13325 2 17169225 to 17170030 805 + pseudogene predicted gene 13325
Gm13322 2 17181743 to 17185487 3744 - lincRNA gene predicted gene 13322
Tssr22743 2 17185478 to 17185492 14 - TSS region transcription start site region 22743
Tssr22744 2 17202088 to 17202092 4 - TSS region transcription start site region 22744
D2Mit267 2 17202994 to 17203123 129 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 267