Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:152622883-152684330

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Defb25 2 152622356 to 152623053 697 - protein coding gene defensin beta 25
Tssr26846 2 152623076 to 152623088 12 - TSS region transcription start site region 26846
Cpgi12453 2 152626613 to 152627577 964 CpG island CpG island 12453
Tssr20811 2 152626932 to 152626957 25 + TSS region transcription start site region 20811
Tssr20812 2 152626985 to 152627018 33 + TSS region transcription start site region 20812
Rem1 2 152627008 to 152635191 8183 + protein coding gene rad and gem related GTP binding protein 1
Tssr26847 2 152627266 to 152627281 15 - TSS region transcription start site region 26847
Tssr26848 2 152627330 to 152627339 9 - TSS region transcription start site region 26848
Cpgi12454 2 152633377 to 152633887 510 CpG island CpG island 12454
Cpgi12455 2 152634348 to 152634833 485 CpG island CpG island 12455
Gm31791 2 152645755 to 152649370 3615 + lncRNA gene predicted gene, 31791
D2Ertd691e 2 152650906 to 152651116 210 DNA segment DNA segment, Chr 2, ERATO Doi 691, expressed
1700030C14Rik 2 152652883 to 152654330 1447 - antisense lncRNA gene RIKEN cDNA 1700030C14 gene
Tssr26849 2 152654253 to 152654259 6 - TSS region transcription start site region 26849
Tssr26850 2 152654261 to 152654266 5 - TSS region transcription start site region 26850
Tssr26851 2 152654288 to 152654304 16 - TSS region transcription start site region 26851
Tssr26852 2 152654314 to 152654333 19 - TSS region transcription start site region 26852
Cpgi12456 2 152669232 to 152670325 1093 CpG island CpG island 12456
H13 2 152669461 to 152708670 39209 + protein coding gene histocompatibility 13
Tssr20813 2 152669462 to 152669539 77 + TSS region transcription start site region 20813
Tssr20814 2 152677571 to 152677594 23 + TSS region transcription start site region 20814