Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cplaq15 | 2 | 43426974 | QTL | circadian period of locomotor activity 15 | ||
Wg2d | 2 | 16529563 | QTL | weight gain in high growth mice 2d | ||
Tssr20701 | 2 | 25 | + | TSS region | transcription start site region 20701 | |
Tssr20702 | 2 | 9 | + | TSS region | transcription start site region 20702 | |
Tssr20703 | 2 | 11 | + | TSS region | transcription start site region 20703 | |
Cst7 | 2 | 8529 | + | protein coding gene | cystatin F (leukocystatin) | |
Tssr20704 | 2 | 56 | + | TSS region | transcription start site region 20704 | |
Tssr20705 | 2 | 9 | + | TSS region | transcription start site region 20705 | |
Apmap | 2 | 25477 | - | protein coding gene | adipocyte plasma membrane associated protein | |
Tssr26703 | 2 | 11 | - | TSS region | transcription start site region 26703 | |
Tssr26704 | 2 | 13 | - | TSS region | transcription start site region 26704 | |
Tssr26705 | 2 | 9 | - | TSS region | transcription start site region 26705 | |
Tssr26706 | 2 | 16 | - | TSS region | transcription start site region 26706 | |
Tssr26707 | 2 | 48 | - | TSS region | transcription start site region 26707 | |
Gm14123 | 2 | 4021 | + | unclassified non-coding RNA gene | predicted gene 14123 | |
Cpgi12408 | 2 | 811 | CpG island | CpG island 12408 | ||
Tssr26708 | 2 | 11 | - | TSS region | transcription start site region 26708 | |
Tssr26709 | 2 | 59 | - | TSS region | transcription start site region 26709 | |
D2Mit261 | 2 | 111 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 261 | ||
Acss1 | 2 | 50129 | - | protein coding gene | acyl-CoA synthetase short-chain family member 1 | |
Tssr26710 | 2 | 25 | - | TSS region | transcription start site region 26710 | |
Tssr26711 | 2 | 12 | - | TSS region | transcription start site region 26711 | |
D2Dcr105 | 2 | 95 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 105 | ||
Tssr20706 | 2 | 36 | + | TSS region | transcription start site region 20706 | |
E130215H24Rik | 2 | 1438 | + | lncRNA gene | RIKEN cDNA E130215H24 gene | |
Cpgi12409 | 2 | 890 | CpG island | CpG island 12409 | ||
Tssr26712 | 2 | 59 | - | TSS region | transcription start site region 26712 | |
Vsx1 | 2 | 8435 | - | protein coding gene | visual system homeobox 1 | |
Cpgi12410 | 2 | 1202 | CpG island | CpG island 12410 | ||
Tssr26713 | 2 | 6 | - | TSS region | transcription start site region 26713 | |
Platr15 | 2 | 2340 | - | lincRNA gene | pluripotency associated transcript 15 | |
Gm28450 | 2 | 637 | - | lincRNA gene | predicted gene 28450 | |
Gm26681 | 2 | 2481 | - | lincRNA gene | predicted gene, 26681 | |
Cpgi12411 | 2 | 746 | CpG island | CpG island 12411 | ||
Tssr20707 | 2 | 111 | + | TSS region | transcription start site region 20707 | |
Entpd6 | 2 | 22633 | + | protein coding gene | ectonucleoside triphosphate diphosphohydrolase 6 | |
Tssr20708 | 2 | 13 | + | TSS region | transcription start site region 20708 | |
Gm30141 | 2 | 13310 | - | lncRNA gene | predicted gene, 30141 | |
Cpgi12412 | 2 | 923 | CpG island | CpG island 12412 | ||
Tssr20709 | 2 | 54 | + | TSS region | transcription start site region 20709 | |
Pygb | 2 | 44952 | + | protein coding gene | brain glycogen phosphorylase | |
Tssr20710 | 2 | 11 | + | TSS region | transcription start site region 20710 | |
D2Mit1003 | 2 | 196 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 1003 | ||
Tssr26714 | 2 | 42 | - | TSS region | transcription start site region 26714 | |
Abhd12 | 2 | 72238 | - | protein coding gene | abhydrolase domain containing 12 | |
Tssr26715 | 2 | 49 | - | TSS region | transcription start site region 26715 | |
Tssr26716 | 2 | 12 | - | TSS region | transcription start site region 26716 | |
Tssr26717 | 2 | 22 | - | TSS region | transcription start site region 26717 | |
Tssr26718 | 2 | 11 | - | TSS region | transcription start site region 26718 | |
Tssr26719 | 2 | 52 | - | TSS region | transcription start site region 26719 | |
Tssr26720 | 2 | 14 | - | TSS region | transcription start site region 26720 | |
Tssr26721 | 2 | 46 | - | TSS region | transcription start site region 26721 | |
Tssr26722 | 2 | 20 | - | TSS region | transcription start site region 26722 | |
Tssr26723 | 2 | 28 | - | TSS region | transcription start site region 26723 | |
Tssr26724 | 2 | 31 | - | TSS region | transcription start site region 26724 | |
Tssr26725 | 2 | 22 | - | TSS region | transcription start site region 26725 | |
Tssr26726 | 2 | 22 | - | TSS region | transcription start site region 26726 | |
Tssr26727 | 2 | 16 | - | TSS region | transcription start site region 26727 | |
Tssr26728 | 2 | 30 | - | TSS region | transcription start site region 26728 | |
Tssr26729 | 2 | 16 | - | TSS region | transcription start site region 26729 | |
Tssr26730 | 2 | 31 | - | TSS region | transcription start site region 26730 | |
Gm23598 | 2 | 143 | + | snoRNA gene | predicted gene, 23598 | |
Cpgi12413 | 2 | 1175 | CpG island | CpG island 12413 | ||
Tssr26731 | 2 | 128 | - | TSS region | transcription start site region 26731 | |
Cpgi12414 | 2 | 353 | CpG island | CpG island 12414 | ||
Gins1 | 2 | 21724 | + | protein coding gene | GINS complex subunit 1 (Psf1 homolog) | |
Tssr20711 | 2 | 77 | + | TSS region | transcription start site region 20711 | |
Gm20550 | 2 | 419 | + | pseudogene | predicted gene 20550 | |
Tssr20712 | 2 | 7 | + | TSS region | transcription start site region 20712 | |
Cpgi12415 | 2 | 256 | CpG island | CpG island 12415 | ||
Gm14143 | 2 | 356 | + | pseudogene | predicted gene 14143 | |
Ninl | 2 | 74879 | - | protein coding gene | ninein-like | |
Gm14142 | 2 | 482 | - | pseudogene | predicted gene 14142 | |
Gm14141 | 2 | 782 | + | pseudogene | predicted gene 14141 | |
Cpgi12416 | 2 | 949 | CpG island | CpG island 12416 | ||
Tssr26732 | 2 | 16 | - | TSS region | transcription start site region 26732 | |
Tssr26733 | 2 | 26 | - | TSS region | transcription start site region 26733 | |
Nanp | 2 | 9694 | - | protein coding gene | N-acetylneuraminic acid phosphatase | |
Cpgi12417 | 2 | 1027 | CpG island | CpG island 12417 | ||
A130094D17Rik | 2 | 2010 | unclassified non-coding RNA gene | RIKEN cDNA A130094D17 gene | ||
Tssr26734 | 2 | 40 | - | TSS region | transcription start site region 26734 | |
Tssr20713 | 2 | 16 | + | TSS region | transcription start site region 20713 | |
Gm22187 | 2 | 128 | + | snoRNA gene | predicted gene, 22187 | |
Gm24199 | 2 | 135 | - | snoRNA gene | predicted gene, 24199 | |
Gm14151 | 2 | 5564 | - | protein coding gene | predicted gene 14151 | |
Gm14147 | 2 | 5573 | + | protein coding gene | predicted gene 14147 | |
Gm14145 | 2 | 1434 | + | lincRNA gene | predicted gene 14145 | |
Gm22517 | 2 | 135 | + | snoRNA gene | predicted gene, 22517 | |
Gm30478 | 2 | 16347 | + | lncRNA gene | predicted gene, 30478 | |
Tssr20714 | 2 | 15 | + | TSS region | transcription start site region 20714 | |
Tssr20715 | 2 | 6 | + | TSS region | transcription start site region 20715 | |
Gm14149 | 2 | 26419 | + | lincRNA gene | predicted gene 14149 | |
Gm19264 | 2 | 1605 | + | pseudogene | predicted gene, 19264 | |
Gm14144 | 2 | 14233 | - | lincRNA gene | predicted gene 14144 | |
Gm23005 | 2 | 135 | - | snoRNA gene | predicted gene, 23005 | |
Gm24077 | 2 | 135 | + | snoRNA gene | predicted gene, 24077 | |
Tssr690 | 2 | 23 | + | TSS region | transcription start site region 690 | |
4930442J19Rik | 2 | 13964 | + | lincRNA gene | RIKEN cDNA 4930442J19 gene | |
4930488B04Rik | 2 | 298 | unclassified gene | RIKEN cDNA 4930488B04 gene | ||
Gm19306 | 2 | 2379 | - | pseudogene | predicted gene, 19306 | |
Gm23261 | 2 | 135 | - | snoRNA gene | predicted gene, 23261 | |
Tssr20716 | 2 | 9 | + | TSS region | transcription start site region 20716 | |
Gm14148 | 2 | 1039 | + | pseudogene | predicted gene 14148 | |
Gm14152 | 2 | 51752 | - | lincRNA gene | predicted gene 14152 | |
Gm46727 | 2 | 1631 | + | pseudogene | predicted gene, 46727 | |
Tssr26735 | 2 | 5 | - | TSS region | transcription start site region 26735 | |
Tssr26736 | 2 | 11 | - | TSS region | transcription start site region 26736 | |
Gm24868 | 2 | 135 | - | snoRNA gene | predicted gene, 24868 | |
Tssr20717 | 2 | 2 | + | TSS region | transcription start site region 20717 | |
Gm14150 | 2 | 1353 | + | pseudogene | predicted gene 14150 | |
Tssr691 | 2 | 20 | + | TSS region | transcription start site region 691 | |
Gm14146 | 2 | 7568 | - | antisense lncRNA gene | predicted gene 14146 | |
4921509C19Rik | 2 | 5611 | - | protein coding gene | RIKEN cDNA 4921509C19 gene | |
Tssr20718 | 2 | 3 | + | TSS region | transcription start site region 20718 | |
Tssr20719 | 2 | 5 | + | TSS region | transcription start site region 20719 | |
Cpgi12418 | 2 | 670 | CpG island | CpG island 12418 | ||
Nsfl1c | 2 | 17128 | + | protein coding gene | NSFL1 (p97) cofactor (p47) | |
Tssr20720 | 2 | 20 | + | TSS region | transcription start site region 20720 | |
Tssr20721 | 2 | 30 | + | TSS region | transcription start site region 20721 | |
Gm14167 | 2 | 1617 | - | antisense lncRNA gene | predicted gene 14167 | |
Tssr20722 | 2 | 7 | + | TSS region | transcription start site region 20722 | |
Tssr20723 | 2 | 5 | + | TSS region | transcription start site region 20723 | |
Cpgi12419 | 2 | 1204 | CpG island | CpG island 12419 | ||
Tssr26737 | 2 | 12 | - | TSS region | transcription start site region 26737 | |
Tssr26738 | 2 | 93 | - | TSS region | transcription start site region 26738 | |
Tssr20724 | 2 | 24 | + | TSS region | transcription start site region 20724 | |
Fkbp1a | 2 | 19208 | + | protein coding gene | FK506 binding protein 1a | |
Tssr20725 | 2 | 8 | + | TSS region | transcription start site region 20725 | |
Tssr20726 | 2 | 91 | + | TSS region | transcription start site region 20726 | |
Tssr20727 | 2 | 11 | + | TSS region | transcription start site region 20727 | |
Tssr20728 | 2 | 3 | + | TSS region | transcription start site region 20728 | |
Tssr20729 | 2 | 4 | + | TSS region | transcription start site region 20729 | |
Tssr20730 | 2 | 42 | + | TSS region | transcription start site region 20730 | |
Tssr20731 | 2 | 14 | + | TSS region | transcription start site region 20731 | |
Tssr20732 | 2 | 53 | + | TSS region | transcription start site region 20732 | |
Tssr20733 | 2 | 4 | + | TSS region | transcription start site region 20733 | |
Tssr20734 | 2 | 18 | + | TSS region | transcription start site region 20734 | |
Tssr26739 | 2 | 7 | - | TSS region | transcription start site region 26739 | |
Gm39959 | 2 | 3248 | - | lncRNA gene | predicted gene, 39959 | |
Tssr20735 | 2 | 21 | + | TSS region | transcription start site region 20735 | |
Sdcbp2 | 2 | 17383 | + | protein coding gene | syndecan binding protein (syntenin) 2 | |
Tssr20736 | 2 | 45 | + | TSS region | transcription start site region 20736 | |
Cpgi12420 | 2 | 620 | CpG island | CpG island 12420 | ||
Snph | 2 | 42044 | - | protein coding gene | syntaphilin | |
D2Mit449 | 2 | 119 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 449 | ||
Cpgi12421 | 2 | 1114 | CpG island | CpG island 12421 | ||
Tssr26740 | 2 | 82 | - | TSS region | transcription start site region 26740 | |
Tssr26741 | 2 | 11 | - | TSS region | transcription start site region 26741 | |
Gm46786 | 2 | 1622 | + | lncRNA gene | predicted gene, 46786 | |
Gm19180 | 2 | 642 | - | pseudogene | predicted gene, 19180 | |
Tssr26742 | 2 | 3 | - | TSS region | transcription start site region 26742 | |
Rad21l | 2 | 23129 | - | protein coding gene | RAD21-like (S. pombe) | |
Cpgi12422 | 2 | 703 | CpG island | CpG island 12422 | ||
Tssr26743 | 2 | 35 | - | TSS region | transcription start site region 26743 | |
Tmem74bos | 2 | 6978 | - | antisense lncRNA gene | transmembrane 74B, opposite strand | |
D2Mit424 | 2 | 150 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 424 | ||
Gm14159 | 2 | 450 | - | pseudogene | predicted gene 14159 | |
Cpgi12423 | 2 | 1433 | CpG island | CpG island 12423 | ||
Tmem74b | 2 | 10149 | + | protein coding gene | transmembrane protein 74B | |
Tssr20737 | 2 | 31 | + | TSS region | transcription start site region 20737 | |
Psmf1 | 2 | 28127 | - | protein coding gene | proteasome (prosome, macropain) inhibitor subunit 1 | |
Tssr26744 | 2 | 22 | - | TSS region | transcription start site region 26744 | |
Tssr26745 | 2 | 14 | - | TSS region | transcription start site region 26745 | |
Tssr26746 | 2 | 39 | - | TSS region | transcription start site region 26746 | |
Cpgi12424 | 2 | 845 | CpG island | CpG island 12424 | ||
Tssr26747 | 2 | 14 | - | TSS region | transcription start site region 26747 | |
Tssr26748 | 2 | 5 | - | TSS region | transcription start site region 26748 | |
Tssr26749 | 2 | 10 | - | TSS region | transcription start site region 26749 | |
Tssr26750 | 2 | 4 | - | TSS region | transcription start site region 26750 | |
Tssr26751 | 2 | 73 | - | TSS region | transcription start site region 26751 | |
Tssr26752 | 2 | 63 | - | TSS region | transcription start site region 26752 | |
Tssr26753 | 2 | 5 | - | TSS region | transcription start site region 26753 | |
4930556L07Rik | 2 | 2400 | - | lincRNA gene | RIKEN cDNA 4930556L07 gene | |
Tssr26754 | 2 | 5 | - | TSS region | transcription start site region 26754 | |
Tssr26755 | 2 | 33 | - | TSS region | transcription start site region 26755 | |
Cpgi12425 | 2 | 299 | CpG island | CpG island 12425 | ||
Gm14153 | 2 | 1138 | - | pseudogene | predicted gene 14153 | |
Scfq1 | 2 | 11096133 | QTL | subcutaneous fat pad weight QTL 1 | ||
Tailq2 | 2 | 11096133 | QTL | tail length QTL 2 | ||
Hylaq2 | 2 | 12478205 | QTL | Hyperlocomotor activity related QTL 2 | ||
Epfq1 | 2 | 11096133 | QTL | epididymal fat pad weight QTL 1 | ||
D2Mit22 | 2 | 188 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 22 | ||
Tssr20738 | 2 | 1 | + | TSS region | transcription start site region 20738 | |
Gm14155 | 2 | 3041 | + | lincRNA gene | predicted gene 14155 | |
Cpgi12426 | 2 | 854 | CpG island | CpG island 12426 | ||
Tssr20739 | 2 | 22 | + | TSS region | transcription start site region 20739 | |
Rspo4 | 2 | 31741 | + | protein coding gene | R-spondin 4 | |
Rspo4os | 2 | 1645 | - | antisense lncRNA gene | R-spondin 4, opposite strand | |
Scgq3 | 2 | 22679978 | QTL | spontaneous crescentic glomerulonephritis QTL 3 | ||
D2Mit26 | 2 | 185 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 26 | ||
Tssr20740 | 2 | 8 | + | TSS region | transcription start site region 20740 | |
Angpt4 | 2 | 33322 | + | protein coding gene | angiopoietin 4 | |
Gm14154 | 2 | 3368 | - | antisense lncRNA gene | predicted gene 14154 | |
Tssr26756 | 2 | 34 | - | TSS region | transcription start site region 26756 | |
Tssr26757 | 2 | 24 | - | TSS region | transcription start site region 26757 | |
Tssr20741 | 2 | 25 | + | TSS region | transcription start site region 20741 | |
Mir1953 | 2 | 88 | - | miRNA gene | microRNA 1953 | |
Fam110a | 2 | 10821 | - | protein coding gene | family with sequence similarity 110, member A | |
Cpgi12427 | 2 | 1047 | CpG island | CpG island 12427 | ||
Tssr20742 | 2 | 2 | + | TSS region | transcription start site region 20742 |