Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Nktcn2 | 2 | 7156537 | QTL | natural killer T cell numbers 2 | ||
Ssrq1 | 2 | 3834652 | QTL | stress response QTL 1 | ||
Dtd1 | 2 | 168794 | + | protein coding gene | D-tyrosyl-tRNA deacylase 1 | |
Tssr20547 | 2 | 2 | + | TSS region | transcription start site region 20547 | |
Tssr680 | 2 | 9 | + | TSS region | transcription start site region 680 | |
Tssr20548 | 2 | 15 | + | TSS region | transcription start site region 20548 | |
Tssr26613 | 2 | 4 | - | TSS region | transcription start site region 26613 | |
Tssr20549 | 2 | 11 | + | TSS region | transcription start site region 20549 | |
Tssr20550 | 2 | 14 | + | TSS region | transcription start site region 20550 | |
Tssr26614 | 2 | 7 | - | TSS region | transcription start site region 26614 | |
Tssr20551 | 2 | 20 | + | TSS region | transcription start site region 20551 | |
Tssr20552 | 2 | 9 | + | TSS region | transcription start site region 20552 | |
Tssr20553 | 2 | 5 | + | TSS region | transcription start site region 20553 | |
Gm11743 | 2 | 2204 | + | pseudogene | predicted gene 11743 | |
Gm39951 | 2 | 25264 | + | lncRNA gene | predicted gene, 39951 | |
Bwq5 | 2 | 99 | QTL | body weight, QTL 5 | ||
D2Mit168 | 2 | 99 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 168 | ||
Bdln3 | 2 | 99 | QTL | body length 3 | ||
D2Dcr98 | 2 | 103 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 98 | ||
D2Mit168.2 | 2 | 129 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 168.2 | ||
Scp2d1 | 2 | 749 | + | protein coding gene | SCP2 sterol-binding domain containing 1 | |
Gm39952 | 2 | 91779 | + | lncRNA gene | predicted gene, 39952 | |
Gm11746 | 2 | 820 | - | pseudogene | predicted gene 11746 | |
D2Dcr99 | 2 | 98 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 99 | ||
D2Mit404.1 | 2 | 136 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 404.1 | ||
D2Mit404 | 2 | 198 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 404 | ||
D2Ertd397e | 2 | 209 | DNA segment | DNA segment, Chr 2, ERATO Doi 397, expressed | ||
Cpgi12361 | 2 | 1876 | CpG island | CpG island 12361 | ||
Tssr20554 | 2 | 15 | + | TSS region | transcription start site region 20554 | |
Tssr20555 | 2 | 67 | + | TSS region | transcription start site region 20555 | |
Slc24a3 | 2 | 474412 | + | protein coding gene | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 | |
Tssr20556 | 2 | 54 | + | TSS region | transcription start site region 20556 | |
Tssr20557 | 2 | 78 | + | TSS region | transcription start site region 20557 | |
Tssr20558 | 2 | 5 | + | TSS region | transcription start site region 20558 | |
Gm14093 | 2 | 41733 | + | sense intronic lncRNA gene | predicted gene 14093 | |
Gm22731 | 2 | 93 | + | rRNA gene | predicted gene, 22731 | |
D2Ertd105e | 2 | 199 | DNA segment | DNA segment, Chr 2, ERATO Doi 105, expressed | ||
Tssr20559 | 2 | 5 | + | TSS region | transcription start site region 20559 | |
D2Dcr100 | 2 | 123 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 100 | ||
D2Mit109 | 2 | 175 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 109 | ||
Lith1 | 2 | -100013104 | QTL | lithogenic gene 1 | ||
Gm22390 | 2 | 324 | - | unclassified non-coding RNA gene | predicted gene, 22390 | |
Gm11759 | 2 | 463 | - | pseudogene | predicted gene 11759 | |
Gm14092 | 2 | 4330 | - | antisense lncRNA gene | predicted gene 14092 | |
Gm19115 | 2 | 651 | + | pseudogene | predicted gene, 19115 | |
Cpgi12362 | 2 | 1317 | CpG island | CpG island 12362 | ||
Tssr20560 | 2 | 16 | + | TSS region | transcription start site region 20560 | |
Tssr20561 | 2 | 23 | + | TSS region | transcription start site region 20561 | |
Tssr20562 | 2 | 21 | + | TSS region | transcription start site region 20562 | |
BC039771 | 2 | 52477 | + | lncRNA gene | cDNA sequence BC039771 | |
Gm11763 | 2 | 311 | - | pseudogene | predicted gene 11763 | |
Tssr681 | 2 | 2 | + | TSS region | transcription start site region 681 | |
Gm34570 | 2 | 1233 | - | lncRNA gene | predicted gene, 34570 | |
Gm34513 | 2 | 12100 | - | lncRNA gene | predicted gene, 34513 | |
Tssr20563 | 2 | 4 | + | TSS region | transcription start site region 20563 | |
Rin2 | 2 | 115889 | + | protein coding gene | Ras and Rab interactor 2 | |
Tssr20564 | 2 | 30 | + | TSS region | transcription start site region 20564 | |
Tssr20565 | 2 | 14 | + | TSS region | transcription start site region 20565 | |
Tssr20566 | 2 | 28 | + | TSS region | transcription start site region 20566 | |
Tssr20567 | 2 | 11 | + | TSS region | transcription start site region 20567 | |
Tssr20568 | 2 | 3 | + | TSS region | transcription start site region 20568 | |
Tssr20569 | 2 | 15 | + | TSS region | transcription start site region 20569 | |
Tssr20570 | 2 | 11 | + | TSS region | transcription start site region 20570 | |
Tssr20571 | 2 | 50 | + | TSS region | transcription start site region 20571 | |
Tssr20572 | 2 | 62 | + | TSS region | transcription start site region 20572 | |
Tssr20573 | 2 | 14 | + | TSS region | transcription start site region 20573 | |
Tssr20574 | 2 | 14 | + | TSS region | transcription start site region 20574 | |
Tssr20575 | 2 | 5 | + | TSS region | transcription start site region 20575 | |
Tssr20576 | 2 | 23 | + | TSS region | transcription start site region 20576 | |
Tssr20577 | 2 | 23 | + | TSS region | transcription start site region 20577 | |
Tssr20578 | 2 | 15 | + | TSS region | transcription start site region 20578 | |
Tssr20579 | 2 | 14 | + | TSS region | transcription start site region 20579 | |
Tssr20580 | 2 | 14 | + | TSS region | transcription start site region 20580 | |
Cpgi12363 | 2 | 787 | CpG island | CpG island 12363 | ||
Tssr20581 | 2 | 15 | + | TSS region | transcription start site region 20581 | |
Tssr20582 | 2 | 36 | + | TSS region | transcription start site region 20582 | |
Tssr20583 | 2 | 46 | + | TSS region | transcription start site region 20583 | |
Tssr20584 | 2 | 23 | + | TSS region | transcription start site region 20584 | |
Tssr20585 | 2 | 13 | + | TSS region | transcription start site region 20585 | |
Tssr20586 | 2 | 3 | + | TSS region | transcription start site region 20586 | |
Tssr20587 | 2 | 7 | + | TSS region | transcription start site region 20587 | |
Tssr20588 | 2 | 13 | + | TSS region | transcription start site region 20588 | |
Tssr20589 | 2 | 9 | + | TSS region | transcription start site region 20589 | |
Tssr20590 | 2 | 25 | + | TSS region | transcription start site region 20590 | |
Gm25026 | 2 | 187 | + | miRNA gene | predicted gene, 25026 | |
Tssr20591 | 2 | 12 | + | TSS region | transcription start site region 20591 | |
Tssr20592 | 2 | 7 | + | TSS region | transcription start site region 20592 | |
D2Dcr101 | 2 | 113 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 101 | ||
Gm39954 | 2 | 14067 | - | lncRNA gene | predicted gene, 39954 | |
Tssr26615 | 2 | 9 | - | TSS region | transcription start site region 26615 | |
Tssr20593 | 2 | 18 | + | TSS region | transcription start site region 20593 | |
Tssr20594 | 2 | 18 | + | TSS region | transcription start site region 20594 | |
Tssr20595 | 2 | 11 | + | TSS region | transcription start site region 20595 | |
Tssr20596 | 2 | 23 | + | TSS region | transcription start site region 20596 | |
Tssr20597 | 2 | 21 | + | TSS region | transcription start site region 20597 | |
Tssr20598 | 2 | 11 | + | TSS region | transcription start site region 20598 | |
Tssr20599 | 2 | 13 | + | TSS region | transcription start site region 20599 | |
Gm11764 | 2 | 613 | + | pseudogene | predicted gene 11764 | |
Naa20 | 2 | 14326 | + | protein coding gene | N(alpha)-acetyltransferase 20, NatB catalytic subunit | |
Cpgi12364 | 2 | 627 | CpG island | CpG island 12364 | ||
Tssr20600 | 2 | 5 | + | TSS region | transcription start site region 20600 | |
Tssr20601 | 2 | 66 | + | TSS region | transcription start site region 20601 | |
Tssr20602 | 2 | 13 | + | TSS region | transcription start site region 20602 | |
Crnkl1 | 2 | 17218 | - | protein coding gene | crooked neck pre-mRNA splicing factor 1 | |
Cpgi12365 | 2 | 788 | CpG island | CpG island 12365 | ||
Tssr26616 | 2 | 56 | - | TSS region | transcription start site region 26616 | |
Tssr20603 | 2 | 21 | + | TSS region | transcription start site region 20603 | |
Cfap61 | 2 | 29442 | + | protein coding gene | cilia and flagella associated protein 61 | |
Tssr20604 | 2 | 13 | + | TSS region | transcription start site region 20604 | |
Tssr20605 | 2 | 44 | + | TSS region | transcription start site region 20605 | |
D2Mit280 | 2 | 199 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 280 | ||
Gm34629 | 2 | 4598 | - | lncRNA gene | predicted gene, 34629 | |
Tssr26617 | 2 | 19 | - | TSS region | transcription start site region 26617 | |
Tssr20606 | 2 | 7 | + | TSS region | transcription start site region 20606 | |
Tssr20607 | 2 | 5 | + | TSS region | transcription start site region 20607 | |
Tssr26618 | 2 | 11 | - | TSS region | transcription start site region 26618 | |
Tssr26619 | 2 | 13 | - | TSS region | transcription start site region 26619 | |
Tssr20608 | 2 | 9 | + | TSS region | transcription start site region 20608 | |
Tssr20609 | 2 | 46 | + | TSS region | transcription start site region 20609 | |
Cpgi12366 | 2 | 647 | CpG island | CpG island 12366 | ||
Cpgi12367 | 2 | 3313 | CpG island | CpG island 12367 | ||
Insm1 | 2 | 3023 | + | protein coding gene | insulinoma-associated 1 | |
Tssr20610 | 2 | 18 | + | TSS region | transcription start site region 20610 | |
Ralgapa2 | 2 | 272442 | - | protein coding gene | Ral GTPase activating protein, alpha subunit 2 (catalytic) | |
A930019D19Rik | 2 | 7874 | + | antisense lncRNA gene | RIKEN cDNA A930019D19 gene | |
Tssr26620 | 2 | 19 | - | TSS region | transcription start site region 26620 | |
B130033B12Rik | 2 | 1696 | unclassified gene | RIKEN cDNA B130033B12 gene | ||
Gm14117 | 2 | 839 | + | pseudogene | predicted gene 14117 | |
9630019E01Rik | 2 | 2237 | unclassified gene | RIKEN cDNA 9630019E01 gene | ||
V25Dq3 | 2 | 0 | QTL | vitamin D inactive form serum level QTL 3 | ||
Cpgi12368 | 2 | 1085 | CpG island | CpG island 12368 | ||
Tssr26621 | 2 | 33 | - | TSS region | transcription start site region 26621 | |
Tssr26622 | 2 | 23 | - | TSS region | transcription start site region 26622 | |
Tssr26623 | 2 | 57 | - | TSS region | transcription start site region 26623 | |
4933406D12Rik | 2 | 3177 | + | lincRNA gene | RIKEN cDNA 4933406D12 gene | |
Gm34689 | 2 | 21841 | + | lncRNA gene | predicted gene, 34689 | |
Gm14111 | 2 | 998 | - | pseudogene | predicted gene 14111 | |
Gm35433 | 2 | 7651 | + | lncRNA gene | predicted gene, 35433 | |
Gm14114 | 2 | 11405 | - | lincRNA gene | predicted gene 14114 | |
Gm35030 | 2 | 2980 | + | lncRNA gene | predicted gene, 35030 | |
Cpgi12369 | 2 | 1111 | CpG island | CpG island 12369 | ||
Tssr20611 | 2 | 40 | + | TSS region | transcription start site region 20611 | |
Cpgi12370 | 2 | 161 | CpG island | CpG island 12370 | ||
Cpgi12371 | 2 | 158 | CpG island | CpG island 12371 | ||
Gm34978 | 2 | 2624 | + | lncRNA gene | predicted gene, 34978 | |
Tssr20612 | 2 | 13 | + | TSS region | transcription start site region 20612 | |
Cpgi12372 | 2 | 375 | CpG island | CpG island 12372 | ||
Cpgi12373 | 2 | 631 | CpG island | CpG island 12373 | ||
Tssr20613 | 2 | 10 | + | TSS region | transcription start site region 20613 | |
Tssr20614 | 2 | 65 | + | TSS region | transcription start site region 20614 | |
Kiz | 2 | 114233 | + | protein coding gene | kizuna centrosomal protein | |
D2Dcr102 | 2 | 95 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 102 | ||
Gm19167 | 2 | 601 | + | pseudogene | predicted gene, 19167 | |
Gm19105 | 2 | 583 | + | pseudogene | predicted gene, 19105 | |
Tssr20615 | 2 | 4 | + | TSS region | transcription start site region 20615 | |
Tssr20616 | 2 | 6 | + | TSS region | transcription start site region 20616 | |
Cpgi12374 | 2 | 1091 | CpG island | CpG island 12374 | ||
Tssr20617 | 2 | 50 | + | TSS region | transcription start site region 20617 | |
Xrn2 | 2 | 65004 | + | protein coding gene | 5'-3' exoribonuclease 2 | |
Tssr20618 | 2 | 70 | + | TSS region | transcription start site region 20618 | |
Tssr26624 | 2 | 18 | - | TSS region | transcription start site region 26624 | |
Tssr26625 | 2 | 14 | - | TSS region | transcription start site region 26625 | |
Tssr20619 | 2 | 9 | + | TSS region | transcription start site region 20619 | |
Tssr20620 | 2 | 10 | + | TSS region | transcription start site region 20620 | |
Tssr20621 | 2 | 4 | + | TSS region | transcription start site region 20621 | |
Tssr20622 | 2 | 15 | + | TSS region | transcription start site region 20622 | |
Tssr20623 | 2 | 4 | + | TSS region | transcription start site region 20623 | |
Tssr20624 | 2 | 4 | + | TSS region | transcription start site region 20624 | |
Nkx2-4 | 2 | 2102 | - | protein coding gene | NK2 homeobox 4 | |
Cpgi12375 | 2 | 2336 | CpG island | CpG island 12375 | ||
Tssr26626 | 2 | 19 | - | TSS region | transcription start site region 26626 | |
Gm34889 | 2 | 42297 | + | lncRNA gene | predicted gene, 34889 | |
Gm14116 | 2 | 804 | - | pseudogene | predicted gene 14116 | |
Nkx2-2 | 2 | 16697 | - | protein coding gene | NK2 homeobox 2 | |
Cpgi12376 | 2 | 206 | CpG island | CpG island 12376 | ||
Cpgi12377 | 2 | 452 | CpG island | CpG island 12377 | ||
Cpgi12378 | 2 | 452 | CpG island | CpG island 12378 | ||
Cpgi12379 | 2 | 1088 | CpG island | CpG island 12379 | ||
Nkx2-2os | 2 | 147598 | + | antisense lncRNA gene | NK2 homeobox 2, opposite strand | |
Cpgi12380 | 2 | 861 | CpG island | CpG island 12380 | ||
Tssr26627 | 2 | 37 | - | TSS region | transcription start site region 26627 | |
Tssr26628 | 2 | 17 | - | TSS region | transcription start site region 26628 | |
Tssr26629 | 2 | 24 | - | TSS region | transcription start site region 26629 | |
Cpgi12381 | 2 | 342 | CpG island | CpG island 12381 | ||
6430503K07Rik | 2 | 983 | + | antisense lncRNA gene | RIKEN cDNA 6430503K07 gene | |
Cpgi12382 | 2 | 345 | CpG island | CpG island 12382 |