Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:14406699-16646712

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131 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc39a12 2 14388316 to 14494977 106661 + protein coding gene solute carrier family 39 (zinc transporter), member 12
D2Ucl2 2 14428328 to 14428816 488 DNA segment DNA segment, Chr 2, University College London 2
C030041M11Rik 2 14483089 to 14483820 731 unclassified gene RIKEN cDNA C030041M11 gene
Gm13266 2 14512591 to 14542811 30220 + lncRNA gene predicted gene 13266
Tssr408 2 14512591 to 14512594 3 + TSS region transcription start site region 408
D2Mit317 2 14598379 to 14598623 244 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 317
Gm32741 2 14598741 to 14603664 4923 - lncRNA gene predicted gene, 32741
Cpgi11219 2 14603764 to 14605175 1411 CpG island CpG island 11219
Tssr16271 2 14603826 to 14603859 33 + TSS region transcription start site region 16271
Gm10849 2 14603990 to 14604611 621 - pseudogene predicted gene 10849
Cacnb2 2 14604053 to 14988811 384758 + protein coding gene calcium channel, voltage-dependent, beta 2 subunit
Tssr16272 2 14604200 to 14604203 3 + TSS region transcription start site region 16272
Tssr16273 2 14604212 to 14604241 29 + TSS region transcription start site region 16273
Tssr16274 2 14604252 to 14604271 19 + TSS region transcription start site region 16274
Gm38105 2 14611217 to 14613837 2620 + unclassified gene predicted gene, 38105
Gm13268 2 14626889 to 14627321 432 - pseudogene predicted gene 13268
Gm13312 2 14672255 to 14672972 717 + pseudogene predicted gene 13312
2900092N22Rik 2 14673404 to 14674812 1408 + unclassified gene RIKEN cDNA 2900092N22 gene
Gm13314 2 14691394 to 14691728 334 - pseudogene predicted gene 13314
Gm13311 2 14692871 to 14693249 378 - pseudogene predicted gene 13311
2900072G11Rik 2 14703152 to 14704716 1564 unclassified gene RIKEN cDNA 2900072G11 gene
Gm10848 2 14706834 to 14739722 32888 - antisense lncRNA gene predicted gene 10848
Gm37006 2 14707665 to 14710338 2673 + unclassified gene predicted gene, 37006
Gm13315 2 14721134 to 14722124 990 + pseudogene predicted gene 13315
Gm38273 2 14735546 to 14737927 2381 - unclassified gene predicted gene, 38273
Tssr16275 2 14739219 to 14739242 23 + TSS region transcription start site region 16275
Tssr16276 2 14739250 to 14739290 40 + TSS region transcription start site region 16276
Cpgi11220 2 14739552 to 14739843 291 CpG island CpG island 11220
Tssr22733 2 14739928 to 14739956 28 - TSS region transcription start site region 22733
Gm13269 2 14740372 to 14767024 26652 - antisense lncRNA gene predicted gene 13269
D2Mit360 2 14762038 to 14762124 86 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 360
Tssr16277 2 14763112 to 14763142 30 + TSS region transcription start site region 16277
Tssr16278 2 14763146 to 14763158 12 + TSS region transcription start site region 16278
Tssr16279 2 14763249 to 14763259 10 + TSS region transcription start site region 16279
Tssr16280 2 14763445 to 14763457 12 + TSS region transcription start site region 16280
Gm13316 2 14811848 to 14812538 690 - pseudogene predicted gene 13316
Tssr22734 2 14823907 to 14823927 20 - TSS region transcription start site region 22734
Tssr16281 2 14824014 to 14824027 13 + TSS region transcription start site region 16281
Tssr16282 2 14824044 to 14824047 3 + TSS region transcription start site region 16282
Tssr16283 2 14824062 to 14824072 10 + TSS region transcription start site region 16283
Tssr16284 2 14824077 to 14824088 11 + TSS region transcription start site region 16284
Tssr16285 2 14824095 to 14824119 24 + TSS region transcription start site region 16285
Tssr16286 2 14824125 to 14824136 11 + TSS region transcription start site region 16286
Tssr16287 2 14824172 to 14824185 13 + TSS region transcription start site region 16287
Tssr16288 2 14873698 to 14873708 10 + TSS region transcription start site region 16288
C030011G24Rik 2 14886695 to 14888134 1439 unclassified gene RIKEN cDNA C030011G24 gene
Tssr16289 2 14914242 to 14914251 9 + TSS region transcription start site region 16289
Gm37437 2 14944908 to 14946844 1936 + unclassified gene predicted gene, 37437
Tssr16290 2 14948107 to 14948116 9 + TSS region transcription start site region 16290
Tssr16291 2 14959757 to 14959761 4 + TSS region transcription start site region 16291
Gm37891 2 14966198 to 14967523 1325 + unclassified gene predicted gene, 37891
Tssr22735 2 14987537 to 14987543 6 - TSS region transcription start site region 22735
Nsun6 2 14995131 to 15055069 59938 - protein coding gene NOL1/NOP2/Sun domain family member 6
Gm36930 2 15031801 to 15034176 2375 - unclassified gene predicted gene, 36930
Tssr22736 2 15049116 to 15049126 10 - TSS region transcription start site region 22736
Cpgi11221 2 15049147 to 15049397 250 CpG island CpG island 11221
Tssr22737 2 15049159 to 15049170 11 - TSS region transcription start site region 22737
Tssr22738 2 15049176 to 15049198 22 - TSS region transcription start site region 22738
Tssr22739 2 15049254 to 15049339 85 - TSS region transcription start site region 22739
Tssr16292 2 15049429 to 15049447 18 + TSS region transcription start site region 16292
Cpgi11222 2 15054805 to 15055920 1115 CpG island CpG island 11222
Tssr409 2 15055035 to 15055049 14 - TSS region transcription start site region 409
Tssr22740 2 15055059 to 15055079 20 - TSS region transcription start site region 22740
Tssr16293 2 15055274 to 15055379 105 + TSS region transcription start site region 16293
Arl5b 2 15055362 to 15082456 27094 + protein coding gene ADP-ribosylation factor-like 5B
Tssr16294 2 15055382 to 15055402 20 + TSS region transcription start site region 16294
Gm38257 2 15056713 to 15059473 2760 + unclassified gene predicted gene, 38257
Cpgi11223 2 15127472 to 15127650 178 CpG island CpG island 11223
Gm13313 2 15127600 to 15128682 1082 + pseudogene predicted gene 13313
Gm13367 2 15342632 to 15343415 783 + pseudogene predicted gene 13367
Tssr410 2 15375576 to 15375577 1 + TSS region transcription start site region 410
Gm13366 2 15385734 to 15386534 800 + pseudogene predicted gene 13366
Gm13365 2 15396748 to 15397720 972 + pseudogene predicted gene 13365
Gm13368 2 15481912 to 15482341 429 + pseudogene predicted gene 13368
Tssr16295 2 15526471 to 15526516 45 + TSS region transcription start site region 16295
Malrd1 2 15526479 to 16255555 729076 + protein coding gene MAM and LDL receptor class A domain containing 1
Tssr16296 2 15526527 to 15526528 1 + TSS region transcription start site region 16296
Tssr16297 2 15526699 to 15526712 13 + TSS region transcription start site region 16297
Gm37595 2 15531113 to 15532854 1741 + unclassified gene predicted gene, 37595
D2Mit316 2 15904967 to 15905087 120 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 316
Gm6587 2 15956958 to 15957512 554 + pseudogene predicted gene 6587
Gm37416 2 16023108 to 16023425 317 - protein coding gene predicted gene, 37416
D2Mit150 2 16154640 to 16154785 145 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 150
Gm13319 2 16268362 to 16270791 2429 - pseudogene predicted gene 13319
D2Mit361 2 16293732 to 16293869 137 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 361
Tssr16298 2 16355637 to 16355656 19 + TSS region transcription start site region 16298
Cpgi11224 2 16355779 to 16357225 1446 CpG island CpG island 11224
Tssr16299 2 16356010 to 16356021 11 + TSS region transcription start site region 16299
Tssr16300 2 16356035 to 16356053 18 + TSS region transcription start site region 16300
Tssr16301 2 16356080 to 16356083 3 + TSS region transcription start site region 16301
Tssr16302 2 16356087 to 16356099 12 + TSS region transcription start site region 16302
Tssr16303 2 16356274 to 16356291 17 + TSS region transcription start site region 16303
Tssr16304 2 16356294 to 16356316 22 + TSS region transcription start site region 16304
Plxdc2 2 16356304 to 16755839 399535 + protein coding gene plexin domain containing 2
Tssr16305 2 16356323 to 16356357 34 + TSS region transcription start site region 16305
Tssr16306 2 16356365 to 16356387 22 + TSS region transcription start site region 16306
Tssr16307 2 16356450 to 16356486 36 + TSS region transcription start site region 16307
Tssr16308 2 16356581 to 16356615 34 + TSS region transcription start site region 16308
Tssr16309 2 16356625 to 16356670 45 + TSS region transcription start site region 16309
Tssr16310 2 16356676 to 16356704 28 + TSS region transcription start site region 16310
Tssr16311 2 16356719 to 16356742 23 + TSS region transcription start site region 16311
Tssr16312 2 16356744 to 16356795 51 + TSS region transcription start site region 16312
Tssr16313 2 16360990 to 16361040 50 + TSS region transcription start site region 16313
Tssr16314 2 16361413 to 16361420 7 + TSS region transcription start site region 16314
Tssr16315 2 16362436 to 16362440 4 + TSS region transcription start site region 16315
Tssr16316 2 16363514 to 16363535 21 + TSS region transcription start site region 16316
Tssr16317 2 16384624 to 16384636 12 + TSS region transcription start site region 16317
Tssr16318 2 16384664 to 16384685 21 + TSS region transcription start site region 16318
Tssr16319 2 16396577 to 16396597 20 + TSS region transcription start site region 16319
Tssr16320 2 16401652 to 16401663 11 + TSS region transcription start site region 16320
Tssr16321 2 16401678 to 16401706 28 + TSS region transcription start site region 16321
Tssr16322 2 16401725 to 16401779 54 + TSS region transcription start site region 16322
Tssr16323 2 16402026 to 16402040 14 + TSS region transcription start site region 16323
Tssr16324 2 16404158 to 16404162 4 + TSS region transcription start site region 16324
Tssr16325 2 16408528 to 16408540 12 + TSS region transcription start site region 16325
Tssr16326 2 16408547 to 16408564 17 + TSS region transcription start site region 16326
Tssr16327 2 16408691 to 16408715 24 + TSS region transcription start site region 16327
Tssr16328 2 16410550 to 16410566 16 + TSS region transcription start site region 16328
Tssr16329 2 16424517 to 16424522 5 + TSS region transcription start site region 16329
Tssr16330 2 16431735 to 16431752 17 + TSS region transcription start site region 16330
Tssr16331 2 16438293 to 16438319 26 + TSS region transcription start site region 16331
Tssr16332 2 16457336 to 16457347 11 + TSS region transcription start site region 16332
Tssr16333 2 16458859 to 16458908 49 + TSS region transcription start site region 16333
Tssr16334 2 16463844 to 16463856 12 + TSS region transcription start site region 16334
Tssr16335 2 16512152 to 16512164 12 + TSS region transcription start site region 16335
Tssr16336 2 16532052 to 16532079 27 + TSS region transcription start site region 16336
Tssr16337 2 16548737 to 16548755 18 + TSS region transcription start site region 16337
Tssr16338 2 16548928 to 16548953 25 + TSS region transcription start site region 16338
Tssr16339 2 16565402 to 16565409 7 + TSS region transcription start site region 16339
Tssr16340 2 16568520 to 16568550 30 + TSS region transcription start site region 16340
Tssr22741 2 16571860 to 16571870 10 - TSS region transcription start site region 22741