Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Otx2m2 | 2 | 25468404 | QTL | orthodenticle homolog 2 modifier 2 | ||
nmf62 | 2 | 19839480 | heritable phenotypic marker | neuroscience mutagenesis facility, 62 | ||
Nktcn2 | 2 | 7156537 | QTL | natural killer T cell numbers 2 | ||
Ssrq1 | 2 | 3834652 | QTL | stress response QTL 1 | ||
Banf2 | 2 | 40877 | + | protein coding gene | barrier to autointegration factor 2 | |
D2Dcr91 | 2 | 95 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 91 | ||
Banf2os | 2 | 9668 | - | antisense lncRNA gene | barrier to autointegration factor 2, opposite strand | |
D2Dcr92 | 2 | 104 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 92 | ||
D2Dcr93 | 2 | 97 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 93 | ||
Tssr20521 | 2 | 11 | + | TSS region | transcription start site region 20521 | |
Tssr677 | 2 | 19 | + | TSS region | transcription start site region 677 | |
Gm11687 | 2 | 885 | - | pseudogene | predicted gene 11687 | |
D2Dcr94 | 2 | 90 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 94 | ||
Cpgi12350 | 2 | 431 | CpG island | CpG island 12350 | ||
Tssr20522 | 2 | 15 | + | TSS region | transcription start site region 20522 | |
Gm5535 | 2 | 16140 | - | lincRNA gene | predicted gene 5535 | |
D2Dcr95 | 2 | 151 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 95 | ||
D2Dcr96 | 2 | 163 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 96 | ||
4930444E06Rik | 2 | 1608 | + | antisense lncRNA gene | RIKEN cDNA 4930444E06 gene | |
Snx5 | 2 | 20779 | - | protein coding gene | sorting nexin 5 | |
Tssr26587 | 2 | 21 | - | TSS region | transcription start site region 26587 | |
Tssr26588 | 2 | 32 | - | TSS region | transcription start site region 26588 | |
Tssr26589 | 2 | 18 | - | TSS region | transcription start site region 26589 | |
Tssr26590 | 2 | 14 | - | TSS region | transcription start site region 26590 | |
Tssr26591 | 2 | 29 | - | TSS region | transcription start site region 26591 | |
Tssr26592 | 2 | 3 | - | TSS region | transcription start site region 26592 | |
Gm11688 | 2 | 307 | - | pseudogene | predicted gene 11688 | |
Gm26165 | 2 | 137 | - | snoRNA gene | predicted gene, 26165 | |
Snord17 | 2 | 220 | - | snoRNA gene | small nucleolar RNA, C/D box 17 | |
Tssr20523 | 2 | 18 | + | TSS region | transcription start site region 20523 | |
Tssr26593 | 2 | 32 | - | TSS region | transcription start site region 26593 | |
Tssr26594 | 2 | 2 | - | TSS region | transcription start site region 26594 | |
Cpgi12351 | 2 | 1249 | CpG island | CpG island 12351 | ||
Tssr26595 | 2 | 46 | - | TSS region | transcription start site region 26595 | |
Tssr26596 | 2 | 29 | - | TSS region | transcription start site region 26596 | |
Tssr20524 | 2 | 17 | + | TSS region | transcription start site region 20524 | |
Tssr20525 | 2 | 50 | + | TSS region | transcription start site region 20525 | |
Tssr26597 | 2 | 20 | - | TSS region | transcription start site region 26597 | |
Tssr26598 | 2 | 11 | - | TSS region | transcription start site region 26598 | |
Tssr26599 | 2 | 11 | - | TSS region | transcription start site region 26599 | |
Mgme1 | 2 | 10376 | + | protein coding gene | mitochondrial genome maintenance exonuclease 1 | |
Tssr20526 | 2 | 71 | + | TSS region | transcription start site region 20526 | |
Tssr20527 | 2 | 44 | + | TSS region | transcription start site region 20527 | |
Tssr20528 | 2 | 5 | + | TSS region | transcription start site region 20528 | |
Ovol2 | 2 | 26905 | - | protein coding gene | ovo like zinc finger 2 | |
D2Mit491 | 2 | 122 | DNA segment | DNA Segment, Chr 2 Massachusetts Institute of Technology 491 | ||
D2Dcr97 | 2 | 95 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 97 | ||
Cpgi12352 | 2 | 1899 | CpG island | CpG island 12352 | ||
Tssr26600 | 2 | 11 | - | TSS region | transcription start site region 26600 | |
Tssr26601 | 2 | 12 | - | TSS region | transcription start site region 26601 | |
Tssr26602 | 2 | 21 | - | TSS region | transcription start site region 26602 | |
Tssr26603 | 2 | 6 | - | TSS region | transcription start site region 26603 | |
Tssr678 | 2 | 5 | + | TSS region | transcription start site region 678 | |
Tssr679 | 2 | 3 | + | TSS region | transcription start site region 679 | |
1700108N11Rik | 2 | 1180 | + | antisense lncRNA gene | RIKEN cDNA 1700108N11 gene | |
Tssr20529 | 2 | 5 | + | TSS region | transcription start site region 20529 | |
Tssr20530 | 2 | 74 | + | TSS region | transcription start site region 20530 | |
Cpgi12353 | 2 | 469 | CpG island | CpG island 12353 | ||
Gm34181 | 2 | 6907 | + | lncRNA gene | predicted gene, 34181 | |
Tssr20531 | 2 | 9 | + | TSS region | transcription start site region 20531 | |
Tssr20532 | 2 | 19 | + | TSS region | transcription start site region 20532 | |
Gm11700 | 2 | 402 | + | pseudogene | predicted gene 11700 | |
Gm11701 | 2 | 978 | - | pseudogene | predicted gene 11701 | |
Tssr26604 | 2 | 5 | - | TSS region | transcription start site region 26604 | |
Cpgi12354 | 2 | 976 | CpG island | CpG island 12354 | ||
Tssr20533 | 2 | 18 | + | TSS region | transcription start site region 20533 | |
Tssr20534 | 2 | 45 | + | TSS region | transcription start site region 20534 | |
Tssr20535 | 2 | 33 | + | TSS region | transcription start site region 20535 | |
Pet117 | 2 | 4354 | + | protein coding gene | PET117 homolog | |
Kat14 | 2 | 38643 | + | protein coding gene | lysine acetyltransferase 14 | |
Tssr20536 | 2 | 12 | + | TSS region | transcription start site region 20536 | |
Tssr20537 | 2 | 3 | + | TSS region | transcription start site region 20537 | |
Gm46768 | 2 | 5211 | - | lncRNA gene | predicted gene, 46768 | |
Cpgi12355 | 2 | 270 | CpG island | CpG island 12355 | ||
Zfp133-ps | 2 | 8514 | + | pseudogene | zinc finger protein 133, pseudogene | |
Tssr20538 | 2 | 39 | + | TSS region | transcription start site region 20538 | |
Gm38402 | 2 | 1556 | + | pseudogene | predicted gene, 38402 | |
Tssr20539 | 2 | 2 | + | TSS region | transcription start site region 20539 | |
Dzank1 | 2 | 56857 | - | protein coding gene | double zinc ribbon and ankyrin repeat domains 1 | |
Tssr26605 | 2 | 10 | - | TSS region | transcription start site region 26605 | |
Tssr26606 | 2 | 11 | - | TSS region | transcription start site region 26606 | |
Cpgi12356 | 2 | 1009 | CpG island | CpG island 12356 | ||
Tssr26607 | 2 | 83 | - | TSS region | transcription start site region 26607 | |
Tssr26608 | 2 | 7 | - | TSS region | transcription start site region 26608 | |
Tssr26609 | 2 | 11 | - | TSS region | transcription start site region 26609 | |
Tssr26610 | 2 | 11 | - | TSS region | transcription start site region 26610 | |
Tssr20540 | 2 | 12 | + | TSS region | transcription start site region 20540 | |
Tssr26611 | 2 | 11 | - | TSS region | transcription start site region 26611 | |
Tssr20541 | 2 | 35 | + | TSS region | transcription start site region 20541 | |
Polr3f | 2 | 14034 | + | protein coding gene | polymerase (RNA) III (DNA directed) polypeptide F | |
Tssr20542 | 2 | 11 | + | TSS region | transcription start site region 20542 | |
Rbbp9 | 2 | 8594 | - | protein coding gene | retinoblastoma binding protein 9, serine hydrolase | |
Cpgi12357 | 2 | 277 | CpG island | CpG island 12357 | ||
Tssr26612 | 2 | 87 | - | TSS region | transcription start site region 26612 | |
Gm34292 | 2 | 9080 | - | lncRNA gene | predicted gene, 34292 | |
Cpgi12358 | 2 | 904 | CpG island | CpG island 12358 | ||
Sec23b | 2 | 34520 | + | protein coding gene | SEC23 homolog B, COPII coat complex component | |
Tssr20543 | 2 | 63 | + | TSS region | transcription start site region 20543 | |
Tssr20544 | 2 | 17 | + | TSS region | transcription start site region 20544 | |
Cpgi12359 | 2 | 579 | CpG island | CpG island 12359 | ||
Tssr20545 | 2 | 27 | + | TSS region | transcription start site region 20545 | |
Smim26 | 2 | 1300 | + | protein coding gene | small integral membrane protein 26 | |
Cpgi12360 | 2 | 683 | CpG island | CpG island 12360 | ||
Tssr20546 | 2 | 93 | + | TSS region | transcription start site region 20546 | |
Dtd1 | 2 | 168794 | + | protein coding gene | D-tyrosyl-tRNA deacylase 1 | |
Gm24823 | 2 | 90 | - | miRNA gene | predicted gene, 24823 | |
D2Mit403 | 2 | 122 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 403 | ||
Lore2 | 2 | 36580860 | QTL | loss of righting induced by ethanol 2 | ||
D2Mit403.1 | 2 | 154 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 403.1 | ||
Tssr20547 | 2 | 2 | + | TSS region | transcription start site region 20547 | |
Tssr680 | 2 | 9 | + | TSS region | transcription start site region 680 | |
Tssr20548 | 2 | 15 | + | TSS region | transcription start site region 20548 | |
Tssr26613 | 2 | 4 | - | TSS region | transcription start site region 26613 | |
Tssr20549 | 2 | 11 | + | TSS region | transcription start site region 20549 | |
Tssr20550 | 2 | 14 | + | TSS region | transcription start site region 20550 | |
Tssr26614 | 2 | 7 | - | TSS region | transcription start site region 26614 | |
Tssr20551 | 2 | 20 | + | TSS region | transcription start site region 20551 | |
Tssr20552 | 2 | 9 | + | TSS region | transcription start site region 20552 | |
Tssr20553 | 2 | 5 | + | TSS region | transcription start site region 20553 | |
Gm11743 | 2 | 2204 | + | pseudogene | predicted gene 11743 | |
Gm39951 | 2 | 25264 | + | lncRNA gene | predicted gene, 39951 | |
Bdln3 | 2 | 99 | QTL | body length 3 | ||
Bwq5 | 2 | 99 | QTL | body weight, QTL 5 | ||
D2Mit168 | 2 | 99 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 168 | ||
D2Dcr98 | 2 | 103 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 98 | ||
D2Mit168.2 | 2 | 129 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 168.2 | ||
Scp2d1 | 2 | 749 | + | protein coding gene | SCP2 sterol-binding domain containing 1 | |
Gm39952 | 2 | 91779 | + | lncRNA gene | predicted gene, 39952 | |
Gm11746 | 2 | 820 | - | pseudogene | predicted gene 11746 | |
D2Dcr99 | 2 | 98 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 99 | ||
D2Mit404.1 | 2 | 136 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 404.1 | ||
D2Mit404 | 2 | 198 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 404 | ||
D2Ertd397e | 2 | 209 | DNA segment | DNA segment, Chr 2, ERATO Doi 397, expressed | ||
Cpgi12361 | 2 | 1876 | CpG island | CpG island 12361 | ||
Tssr20554 | 2 | 15 | + | TSS region | transcription start site region 20554 | |
Tssr20555 | 2 | 67 | + | TSS region | transcription start site region 20555 | |
Slc24a3 | 2 | 474412 | + | protein coding gene | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 | |
Tssr20556 | 2 | 54 | + | TSS region | transcription start site region 20556 | |
Tssr20557 | 2 | 78 | + | TSS region | transcription start site region 20557 | |
Tssr20558 | 2 | 5 | + | TSS region | transcription start site region 20558 | |
Gm14093 | 2 | 41733 | + | sense intronic lncRNA gene | predicted gene 14093 | |
Gm22731 | 2 | 93 | + | rRNA gene | predicted gene, 22731 | |
D2Ertd105e | 2 | 199 | DNA segment | DNA segment, Chr 2, ERATO Doi 105, expressed | ||
Tssr20559 | 2 | 5 | + | TSS region | transcription start site region 20559 | |
D2Dcr100 | 2 | 123 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 100 | ||
D2Mit109 | 2 | 175 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 109 | ||
Lith1 | 2 | -100013104 | QTL | lithogenic gene 1 | ||
Gm22390 | 2 | 324 | - | unclassified non-coding RNA gene | predicted gene, 22390 | |
Gm11759 | 2 | 463 | - | pseudogene | predicted gene 11759 | |
Gm14092 | 2 | 4330 | - | antisense lncRNA gene | predicted gene 14092 | |
Gm19115 | 2 | 651 | + | pseudogene | predicted gene, 19115 | |
Cpgi12362 | 2 | 1317 | CpG island | CpG island 12362 | ||
Tssr20560 | 2 | 16 | + | TSS region | transcription start site region 20560 | |
Tssr20561 | 2 | 23 | + | TSS region | transcription start site region 20561 | |
Tssr20562 | 2 | 21 | + | TSS region | transcription start site region 20562 | |
BC039771 | 2 | 52477 | + | lncRNA gene | cDNA sequence BC039771 | |
Gm11763 | 2 | 311 | - | pseudogene | predicted gene 11763 | |
Tssr681 | 2 | 2 | + | TSS region | transcription start site region 681 | |
Gm34570 | 2 | 1233 | - | lncRNA gene | predicted gene, 34570 | |
Gm34513 | 2 | 12100 | - | lncRNA gene | predicted gene, 34513 | |
Tssr20563 | 2 | 4 | + | TSS region | transcription start site region 20563 | |
Rin2 | 2 | 115889 | + | protein coding gene | Ras and Rab interactor 2 | |
Tssr20564 | 2 | 30 | + | TSS region | transcription start site region 20564 | |
Tssr20565 | 2 | 14 | + | TSS region | transcription start site region 20565 | |
Tssr20566 | 2 | 28 | + | TSS region | transcription start site region 20566 | |
Tssr20567 | 2 | 11 | + | TSS region | transcription start site region 20567 | |
Tssr20568 | 2 | 3 | + | TSS region | transcription start site region 20568 | |
Tssr20569 | 2 | 15 | + | TSS region | transcription start site region 20569 | |
Tssr20570 | 2 | 11 | + | TSS region | transcription start site region 20570 | |
Tssr20571 | 2 | 50 | + | TSS region | transcription start site region 20571 | |
Tssr20572 | 2 | 62 | + | TSS region | transcription start site region 20572 | |
Tssr20573 | 2 | 14 | + | TSS region | transcription start site region 20573 | |
Tssr20574 | 2 | 14 | + | TSS region | transcription start site region 20574 | |
Tssr20575 | 2 | 5 | + | TSS region | transcription start site region 20575 | |
Tssr20576 | 2 | 23 | + | TSS region | transcription start site region 20576 | |
Tssr20577 | 2 | 23 | + | TSS region | transcription start site region 20577 | |
Tssr20578 | 2 | 15 | + | TSS region | transcription start site region 20578 | |
Tssr20579 | 2 | 14 | + | TSS region | transcription start site region 20579 | |
Tssr20580 | 2 | 14 | + | TSS region | transcription start site region 20580 | |
Cpgi12363 | 2 | 787 | CpG island | CpG island 12363 | ||
Tssr20581 | 2 | 15 | + | TSS region | transcription start site region 20581 | |
Tssr20582 | 2 | 36 | + | TSS region | transcription start site region 20582 | |
Tssr20583 | 2 | 46 | + | TSS region | transcription start site region 20583 | |
Tssr20584 | 2 | 23 | + | TSS region | transcription start site region 20584 | |
Tssr20585 | 2 | 13 | + | TSS region | transcription start site region 20585 | |
Tssr20586 | 2 | 3 | + | TSS region | transcription start site region 20586 | |
Tssr20587 | 2 | 7 | + | TSS region | transcription start site region 20587 | |
Tssr20588 | 2 | 13 | + | TSS region | transcription start site region 20588 | |
Tssr20589 | 2 | 9 | + | TSS region | transcription start site region 20589 | |
Tssr20590 | 2 | 25 | + | TSS region | transcription start site region 20590 | |
Gm25026 | 2 | 187 | + | miRNA gene | predicted gene, 25026 | |
Tssr20591 | 2 | 12 | + | TSS region | transcription start site region 20591 | |
Tssr20592 | 2 | 7 | + | TSS region | transcription start site region 20592 | |
D2Dcr101 | 2 | 113 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 101 | ||
Gm39954 | 2 | 14067 | - | lncRNA gene | predicted gene, 39954 | |
Tssr26615 | 2 | 9 | - | TSS region | transcription start site region 26615 | |
Tssr20593 | 2 | 18 | + | TSS region | transcription start site region 20593 | |
Tssr20594 | 2 | 18 | + | TSS region | transcription start site region 20594 | |
Tssr20595 | 2 | 11 | + | TSS region | transcription start site region 20595 | |
Tssr20596 | 2 | 23 | + | TSS region | transcription start site region 20596 |