Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13873607-14273625

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr16222 2 13878952 to 13878958 6 + TSS region transcription start site region 16222
D930036K23Rik 2 14016086 to 14020049 3963 - unclassified gene RIKEN cDNA D930036K23 gene
5730447C08Rik 2 14020977 to 14021395 418 unclassified gene RIKEN cDNA 5730447C08 gene
D2Bwg0405e 2 14023789 to 14023952 163 DNA segment DNA segment, Chr 2, Brigham & Women's Genetics 0405 expressed
Hacd1 2 14026829 to 14056035 29206 - protein coding gene 3-hydroxyacyl-CoA dehydratase 1
Gm37894 2 14037825 to 14040423 2598 - unclassified gene predicted gene, 37894
Cpgi11217 2 14054913 to 14056485 1572 CpG island CpG island 11217
Tssr22727 2 14055890 to 14055917 27 - TSS region transcription start site region 22727
Tssr22728 2 14055929 to 14055956 27 - TSS region transcription start site region 22728
Tssr22729 2 14055963 to 14056022 59 - TSS region transcription start site region 22729
Tssr22730 2 14056029 to 14056044 15 - TSS region transcription start site region 22730
Tssr22731 2 14059899 to 14059915 16 - TSS region transcription start site region 22731
Stamos 2 14070333 to 14073934 3601 - lncRNA gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand
Cpgi11218 2 14073507 to 14074701 1194 CpG island CpG island 11218
Tssr16223 2 14073607 to 14073625 18 + TSS region transcription start site region 16223
Tssr16224 2 14073629 to 14073672 43 + TSS region transcription start site region 16224
Stam 2 14073654 to 14148338 74684 + protein coding gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Tssr22732 2 14073851 to 14073867 16 - TSS region transcription start site region 22732
Tssr16225 2 14074091 to 14074146 55 + TSS region transcription start site region 16225
Tssr16226 2 14074147 to 14074191 44 + TSS region transcription start site region 16226
Tssr16227 2 14074218 to 14074235 17 + TSS region transcription start site region 16227
Tssr16228 2 14130842 to 14130853 11 + TSS region transcription start site region 16228
Gm37499 2 14149820 to 14153297 3477 + unclassified gene predicted gene, 37499
Tssr16229 2 14174492 to 14174509 17 + TSS region transcription start site region 16229
Tssr16230 2 14174513 to 14174546 33 + TSS region transcription start site region 16230
Tmem236 2 14174524 to 14221993 47469 + protein coding gene transmembrane protein 236
Tssr16231 2 14174550 to 14174564 14 + TSS region transcription start site region 16231
Gm13320 2 14189623 to 14189763 140 - pseudogene predicted gene 13320
Tssr16232 2 14201548 to 14201551 3 + TSS region transcription start site region 16232
Tssr16233 2 14229390 to 14229404 14 + TSS region transcription start site region 16233
Mrc1 2 14229414 to 14332023 102609 + protein coding gene mannose receptor, C type 1
Tssr16234 2 14247543 to 14247564 21 + TSS region transcription start site region 16234
Tssr16235 2 14258620 to 14258664 44 + TSS region transcription start site region 16235
Mir511 2 14261003 to 14261081 78 + miRNA gene microRNA 511
Tssr16236 2 14261176 to 14261226 50 + TSS region transcription start site region 16236
Tssr16237 2 14263308 to 14263321 13 + TSS region transcription start site region 16237
Tssr16238 2 14263394 to 14263409 15 + TSS region transcription start site region 16238
Tssr16239 2 14266497 to 14266509 12 + TSS region transcription start site region 16239
Tssr16240 2 14271698 to 14271709 11 + TSS region transcription start site region 16240
Tssr16241 2 14273462 to 14273466 4 + TSS region transcription start site region 16241
Tssr16242 2 14273504 to 14273533 29 + TSS region transcription start site region 16242
Tssr16243 2 14273583 to 14273588 5 + TSS region transcription start site region 16243