Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:133207023-134957217

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12315 2 133233825 to 133234216 391 CpG island CpG island 12315
D2Mit107 2 133235703 to 133235821 118 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 107
Prdt1 2 133235703 to 133235821 118 QTL prion disease incubation time 1
D2Dcr77 2 133235704 to 133235809 105 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 77
D2Mit488 2 133279206 to 133279310 104 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 488
Gm27449 2 133330924 to 133330982 58 + snRNA gene predicted gene, 27449
Gm31851 2 133425698 to 133429858 4160 - lncRNA gene predicted gene, 31851
A430048G15Rik 2 133432097 to 133451975 19878 + lincRNA gene RIKEN cDNA A430048G15 gene
D2Mit70 2 133454576 to 133454765 189 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 70
Gm14100 2 133463118 to 133465784 2666 + lincRNA gene predicted gene 14100
D2Mit192 2 133464410 to 133464554 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 192
Ses7 2 133464410 to 133464554 144 QTL salmonella enteritidis susceptibility 7
Tssr20346 2 133497894 to 133497895 1 + TSS region transcription start site region 20346
Cpgi12316 2 133551854 to 133553554 1700 CpG island CpG island 12316
Bmp2 2 133552159 to 133562885 10726 + protein coding gene bone morphogenetic protein 2
Tssr20347 2 133552218 to 133552237 19 + TSS region transcription start site region 20347
Tssr20348 2 133552275 to 133552278 3 + TSS region transcription start site region 20348
Tssr20349 2 133553004 to 133553017 13 + TSS region transcription start site region 20349
Cpgi12317 2 133554248 to 133554977 729 CpG island CpG island 12317
D2Mit279 2 133560540 to 133560690 150 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 279
Mir3090 2 133564708 to 133564794 86 + miRNA gene microRNA 3090
Gm25258 2 133584315 to 133584421 106 - snRNA gene predicted gene, 25258
Gm39940 2 133743168 to 133790007 46839 + lncRNA gene predicted gene, 39940
Tssr20350 2 133856948 to 133856952 4 + TSS region transcription start site region 20350
D2Mit46.2 2 134028992 to 134029143 151 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 46.2
D2Mit46 2 134029150 to 134029264 114 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 46
D2Mit19.1 2 134030232 to 134030459 227 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 19.1
D2Mit19 2 134030427 to 134030529 102 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 19
D2Mit19.2 2 134030497 to 134030632 135 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 19.2
D2Mit193 2 134082023 to 134082217 194 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 193
Cpgi12318 2 134137598 to 134137823 225 CpG island CpG island 12318
Tssr26503 2 134488756 to 134488758 2 - TSS region transcription start site region 26503
Hao1 2 134497361 to 134554352 56991 - protein coding gene hydroxyacid oxidase 1, liver
D2Mit165 2 134527073 to 134527215 142 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 165
D2Mit448 2 134540056 to 134540162 106 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 448
D2Dcr78 2 134540059 to 134540151 92 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 78
Tssr164680 2 134546354 to 134546355 1 - TSS region transcription start site region 164680
Tssr26504 2 134554348 to 134554369 21 - TSS region transcription start site region 26504
Tmx4 2 134594501 to 134644121 49620 - protein coding gene thioredoxin-related transmembrane protein 4
Tssr26505 2 134596652 to 134596671 19 - TSS region transcription start site region 26505
Tssr26506 2 134634468 to 134634472 4 - TSS region transcription start site region 26506
Cpgi12319 2 134643555 to 134644360 805 CpG island CpG island 12319
Tssr26507 2 134644019 to 134644042 23 - TSS region transcription start site region 26507
Tssr26508 2 134644051 to 134644058 7 - TSS region transcription start site region 26508
Tssr26509 2 134644079 to 134644109 30 - TSS region transcription start site region 26509
Tssr26510 2 134644125 to 134644143 18 - TSS region transcription start site region 26510
Tssr26511 2 134644155 to 134644166 11 - TSS region transcription start site region 26511
Tssr26512 2 134644177 to 134644188 11 - TSS region transcription start site region 26512
Gm14037 2 134730795 to 134731107 312 - pseudogene predicted gene 14037
Gm14038 2 134762824 to 134763630 806 - pseudogene predicted gene 14038
Cpgi12320 2 134785898 to 134786877 979 CpG island CpG island 12320
Tssr20351 2 134786154 to 134786170 16 + TSS region transcription start site region 20351
Plcb1 2 134786164 to 135475258 689094 + protein coding gene phospholipase C, beta 1
Tssr20352 2 134786175 to 134786196 21 + TSS region transcription start site region 20352
Tssr20353 2 134786198 to 134786218 20 + TSS region transcription start site region 20353
Gm14036 2 134803949 to 134804428 479 + pseudogene predicted gene 14036
Tssr20354 2 134845529 to 134845540 11 + TSS region transcription start site region 20354
Tssr664 2 134845567 to 134845574 7 + TSS region transcription start site region 664
Tssr20355 2 134855284 to 134855304 20 + TSS region transcription start site region 20355
Tssr20356 2 134862963 to 134862965 2 + TSS region transcription start site region 20356
Gm39941 2 134925794 to 134932369 6575 + lncRNA gene predicted gene, 39941
D2Dcr79 2 134949670 to 134949788 118 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 79