Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13253584-13573597

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rsu1 2 13076967 to 13271416 194449 - protein coding gene Ras suppressor protein 1
Tssr22689 2 13257911 to 13257917 6 - TSS region transcription start site region 22689
Cpgi11213 2 13271170 to 13271843 673 CpG island CpG island 11213
Tssr22690 2 13271268 to 13271348 80 - TSS region transcription start site region 22690
Tssr22691 2 13271419 to 13271437 18 - TSS region transcription start site region 22691
Tssr22692 2 13271438 to 13271446 8 - TSS region transcription start site region 22692
Gm13270 2 13271540 to 13310119 38579 + lncRNA gene predicted gene 13270
Tssr16184 2 13271579 to 13271630 51 + TSS region transcription start site region 16184
Cubn 2 13276338 to 13491813 215475 - protein coding gene cubilin (intrinsic factor-cobalamin receptor)
Tssr22693 2 13283265 to 13283273 8 - TSS region transcription start site region 22693
Tssr22694 2 13410800 to 13410805 5 - TSS region transcription start site region 22694
Tssr16185 2 13411015 to 13411019 4 + TSS region transcription start site region 16185
Tssr22695 2 13413584 to 13413597 13 - TSS region transcription start site region 22695
Tssr22696 2 13424752 to 13424763 11 - TSS region transcription start site region 22696
Tssr22697 2 13424768 to 13424785 17 - TSS region transcription start site region 22697
Tssr16186 2 13481070 to 13481101 31 + TSS region transcription start site region 16186
Tssr22698 2 13491847 to 13491890 43 - TSS region transcription start site region 22698
Tssr22699 2 13491891 to 13491896 5 - TSS region transcription start site region 22699
Tssr22700 2 13491900 to 13491940 40 - TSS region transcription start site region 22700
Tssr22701 2 13491953 to 13491958 5 - TSS region transcription start site region 22701
Tssr22702 2 13491960 to 13491974 14 - TSS region transcription start site region 22702
Tssr22703 2 13491977 to 13492025 48 - TSS region transcription start site region 22703
Tssr22704 2 13492034 to 13492046 12 - TSS region transcription start site region 22704
Tssr22705 2 13493651 to 13493657 6 - TSS region transcription start site region 22705
Tssr22706 2 13493660 to 13493670 10 - TSS region transcription start site region 22706
Tssr22707 2 13493674 to 13493690 16 - TSS region transcription start site region 22707
Tssr22708 2 13493695 to 13493705 10 - TSS region transcription start site region 22708
Trdmt1 2 13509014 to 13544668 35654 - protein coding gene tRNA aspartic acid methyltransferase 1
Cpgi11214 2 13544420 to 13544795 375 CpG island CpG island 11214
Tssr22709 2 13544651 to 13544673 22 - TSS region transcription start site region 22709
Gm9875 2 13558323 to 13571736 13413 + lncRNA gene predicted gene 9875
Tssr22710 2 13558505 to 13558512 7 - TSS region transcription start site region 22710
D2Mit149.1 2 13571471 to 13571680 209 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 149.1
D2Mit149 2 13571654 to 13571852 198 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 149
Tssr22711 2 13572015 to 13572019 4 - TSS region transcription start site region 22711
Tssr22712 2 13573557 to 13573565 8 - TSS region transcription start site region 22712