MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:130420329-130480349

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pced1a	2	130417683 to 130424641	6958	-	protein coding gene	PC-esterase domain containing 1A
Cpgi12264	2	130423408 to 130424925	1517		CpG island	CpG island 12264
Tssr26294	2	130423748 to 130423812	64	-	TSS region	transcription start site region 26294
Tssr26295	2	130424242 to 130424293	51	-	TSS region	transcription start site region 26295
Tssr26296	2	130424296 to 130424306	10	-	TSS region	transcription start site region 26296
Tssr20210	2	130424321 to 130424393	72	+	TSS region	transcription start site region 20210
Vps16	2	130424339 to 130444269	19930	+	protein coding gene	VSP16 CORVET/HOPS core subunit
Tssr26297	2	130424673 to 130424728	55	-	TSS region	transcription start site region 26297
Tssr26298	2	130424742 to 130424790	48	-	TSS region	transcription start site region 26298
D2Mit78	2	130449734 to 130449948	214		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 78
Cpgi12265	2	130449893 to 130450944	1051		CpG island	CpG island 12265
Ptpra	2	130450251 to 130554300	104049	+	protein coding gene	protein tyrosine phosphatase, receptor type, A
Tssr20211	2	130450259 to 130450309	50	+	TSS region	transcription start site region 20211
Tssr20212	2	130450310 to 130450326	16	+	TSS region	transcription start site region 20212
Tssr20213	2	130450329 to 130450349	20	+	TSS region	transcription start site region 20213
Tssr20214	2	130450379 to 130450384	5	+	TSS region	transcription start site region 20214
Tssr20215	2	130479701 to 130479711	10	+	TSS region	transcription start site region 20215