Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:129628568-130269207

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sirpa 2 129592835 to 129632228 39393 + protein coding gene signal-regulatory protein alpha
Tssr20162 2 129629981 to 129629993 12 + TSS region transcription start site region 20162
Tssr26273 2 129629982 to 129630002 20 - TSS region transcription start site region 26273
Tssr20163 2 129630001 to 129630023 22 + TSS region transcription start site region 20163
Tssr26274 2 129630042 to 129630074 32 - TSS region transcription start site region 26274
Tssr20164 2 129630062 to 129630077 15 + TSS region transcription start site region 20164
Tssr20165 2 129630092 to 129630100 8 + TSS region transcription start site region 20165
Tssr20166 2 129630111 to 129630134 23 + TSS region transcription start site region 20166
Tssr20167 2 129630185 to 129630199 14 + TSS region transcription start site region 20167
Tssr20168 2 129630311 to 129630333 22 + TSS region transcription start site region 20168
Tssr20169 2 129630407 to 129630427 20 + TSS region transcription start site region 20169
Tssr20170 2 129630575 to 129630586 11 + TSS region transcription start site region 20170
Tssr20171 2 129630587 to 129630600 13 + TSS region transcription start site region 20171
Tssr26275 2 129630622 to 129630651 29 - TSS region transcription start site region 26275
Tssr20172 2 129630655 to 129630668 13 + TSS region transcription start site region 20172
Tssr20173 2 129630687 to 129630716 29 + TSS region transcription start site region 20173
Tssr20174 2 129630732 to 129630914 182 + TSS region transcription start site region 20174
Tssr20175 2 129630918 to 129630929 11 + TSS region transcription start site region 20175
Tssr20176 2 129630936 to 129630961 25 + TSS region transcription start site region 20176
Tssr20177 2 129631268 to 129631279 11 + TSS region transcription start site region 20177
Tssr20178 2 129631498 to 129631512 14 + TSS region transcription start site region 20178
Tssr20179 2 129636198 to 129636212 14 + TSS region transcription start site region 20179
Pdyn 2 129686565 to 129699844 13279 - protein coding gene prodynorphin
Cpgi12252 2 129688041 to 129688347 306 CpG island CpG island 12252
Tssr26276 2 129699805 to 129699818 13 - TSS region transcription start site region 26276
Tssr26277 2 129699836 to 129699850 14 - TSS region transcription start site region 26277
Gm14046 2 129749901 to 129750409 508 + pseudogene predicted gene 14046
Stk35os1 2 129798369 to 129801459 3090 - lncRNA gene serine/threonine kinase 35, opposite strand 1
Cpgi12253 2 129800164 to 129802089 1925 CpG island CpG island 12253
Tssr20180 2 129800284 to 129800293 9 + TSS region transcription start site region 20180
Tssr20181 2 129800295 to 129800319 24 + TSS region transcription start site region 20181
Tssr20182 2 129800451 to 129800526 75 + TSS region transcription start site region 20182
Stk35 2 129800517 to 129832287 31770 + protein coding gene serine/threonine kinase 35
Tssr20183 2 129800582 to 129800641 59 + TSS region transcription start site region 20183
Tssr20184 2 129800668 to 129800698 30 + TSS region transcription start site region 20184
Tssr20185 2 129800711 to 129800728 17 + TSS region transcription start site region 20185
Tssr20186 2 129800731 to 129800740 9 + TSS region transcription start site region 20186
Tssr20187 2 129800742 to 129800765 23 + TSS region transcription start site region 20187
Tssr20188 2 129801392 to 129801396 4 + TSS region transcription start site region 20188
Tssr26278 2 129801440 to 129801464 24 - TSS region transcription start site region 26278
Tssr26279 2 129801478 to 129801495 17 - TSS region transcription start site region 26279
Tssr20189 2 129801566 to 129801605 39 + TSS region transcription start site region 20189
Tssr20190 2 129832069 to 129832075 6 + TSS region transcription start site region 20190
Gm39933 2 129882483 to 129897531 15048 - lncRNA gene predicted gene, 39933
Tssr26280 2 129895385 to 129895399 14 - TSS region transcription start site region 26280
Cpgi12254 2 129908913 to 129909583 670 CpG island CpG island 12254
Gm10183 2 129927502 to 129929631 2129 unclassified gene predicted gene 10183
Gm28196 2 129948568 to 129949207 639 + lincRNA gene predicted gene 28196
Tssr20191 2 130012336 to 130012350 14 + TSS region transcription start site region 20191
Tgm3 2 130012349 to 130050399 38050 + protein coding gene transglutaminase 3, E polypeptide
Mir6339 2 130016292 to 130016408 116 - miRNA gene microRNA 6339
Tssr20192 2 130038450 to 130038476 26 + TSS region transcription start site region 20192
Tssr20193 2 130040415 to 130040448 33 + TSS region transcription start site region 20193
Tssr20194 2 130044531 to 130044540 9 + TSS region transcription start site region 20194
Tssr20195 2 130044616 to 130044621 5 + TSS region transcription start site region 20195
Tssr26281 2 130048343 to 130048348 5 - TSS region transcription start site region 26281
Tssr26282 2 130048533 to 130048550 17 - TSS region transcription start site region 26282
Tssr20196 2 130048544 to 130048569 25 + TSS region transcription start site region 20196
Tssr26283 2 130048588 to 130048599 11 - TSS region transcription start site region 26283
Gm22424 2 130071724 to 130071810 86 + snoRNA gene predicted gene, 22424
Gm24665 2 130086041 to 130086169 128 + snoRNA gene predicted gene, 24665
AU015228 2 130100524 to 130101843 1319 + pseudogene expressed sequence AU015228
Cpgi12255 2 130101400 to 130101621 221 CpG island CpG island 12255
Tgm6 2 130112416 to 130154232 41816 + protein coding gene transglutaminase 6
Tssr20197 2 130123275 to 130123293 18 + TSS region transcription start site region 20197
Tssr20198 2 130123310 to 130123314 4 + TSS region transcription start site region 20198
Cpgi12256 2 130145016 to 130145208 192 CpG island CpG island 12256
Snrpb 2 130171636 to 130179385 7749 - protein coding gene small nuclear ribonucleoprotein B
Tssr20199 2 130171883 to 130171905 22 + TSS region transcription start site region 20199
Cpgi12257 2 130178547 to 130179847 1300 CpG island CpG island 12257
Tssr26284 2 130179310 to 130179376 66 - TSS region transcription start site region 26284
Tmc2 2 130195194 to 130264445 69251 + protein coding gene transmembrane channel-like gene family 2