Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:128948545-129129979

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14028 2 128952972 to 128953450 478 - pseudogene predicted gene 14028
4933427J07Rik 2 128955671 to 128957861 2190 - antisense lncRNA gene RIKEN cDNA 4933427J07 gene
Gm10762 2 128966593 to 128967725 1132 - protein coding gene predicted gene 10762
Cpgi12242 2 128966957 to 128968571 1614 CpG island CpG island 12242
Tssr26179 2 128967233 to 128967262 29 - TSS region transcription start site region 26179
Tssr20091 2 128967349 to 128967380 31 + TSS region transcription start site region 20091
Tssr20092 2 128967383 to 128967443 60 + TSS region transcription start site region 20092
Zc3h6 2 128967402 to 129018563 51161 + protein coding gene zinc finger CCCH type containing 6
Tssr20093 2 128967778 to 128967811 33 + TSS region transcription start site region 20093
Tssr26180 2 128967996 to 128968030 34 - TSS region transcription start site region 26180
Tssr26181 2 128968043 to 128968064 21 - TSS region transcription start site region 26181
Tssr26182 2 128968225 to 128968241 16 - TSS region transcription start site region 26182
Gm14027 2 129016952 to 129021756 4804 + unclassified non-coding RNA gene predicted gene 14027
Tssr26183 2 129019684 to 129019687 3 - TSS region transcription start site region 26183
Vinac1 2 129025073 to 129048172 23099 - protein coding gene vinculin/alpha-catenin family member 1
4930402C16Rik 2 129038545 to 129039979 1434 unclassified gene RIKEN cDNA 4930402C16 gene
Cpgi12243 2 129038708 to 129039668 960 CpG island CpG island 12243
Tssr26184 2 129055810 to 129055817 7 - TSS region transcription start site region 26184
Gm14022 2 129060946 to 129065686 4740 - unclassified non-coding RNA gene predicted gene 14022
Cpgi12244 2 129065347 to 129066608 1261 CpG island CpG island 12244
Tssr26185 2 129065900 to 129065916 16 - TSS region transcription start site region 26185
Tssr20094 2 129065934 to 129065994 60 + TSS region transcription start site region 20094
Ttl 2 129065947 to 129096283 30336 + protein coding gene tubulin tyrosine ligase
Tssr20095 2 129066003 to 129066015 12 + TSS region transcription start site region 20095
D2Mit399.2 2 129089728 to 129089839 111 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 399.2
D2Mit399.1 2 129089906 to 129090015 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 399.1
Gm46764 2 129094408 to 129100949 6541 - lncRNA gene predicted gene, 46764
Cpgi12245 2 129100870 to 129101326 456 CpG island CpG island 12245
Tssr26186 2 129100907 to 129100957 50 - TSS region transcription start site region 26186
Tssr20096 2 129100982 to 129100989 7 + TSS region transcription start site region 20096
Polr1b 2 129100995 to 129126594 25599 + protein coding gene polymerase (RNA) I polypeptide B
Tssr20097 2 129101000 to 129101066 66 + TSS region transcription start site region 20097
Tssr20098 2 129101074 to 129101083 9 + TSS region transcription start site region 20098
Tssr20099 2 129122884 to 129122886 2 + TSS region transcription start site region 20099
Tssr20100 2 129123064 to 129123069 5 + TSS region transcription start site region 20100
Cpgi12246 2 129127216 to 129127393 177 CpG island CpG island 12246
Cpgi12247 2 129129242 to 129130080 838 CpG island CpG island 12247
Chchd5 2 129129700 to 129134112 4412 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 5
Tssr20101 2 129129782 to 129129791 9 + TSS region transcription start site region 20101
Tssr20102 2 129129797 to 129129831 34 + TSS region transcription start site region 20102