Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:125658524-125788537

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
pta 2 119524913 to 125725738 6200825 heritable phenotypic marker persistent truncus arteriosus
Shc4 2 125627447 to 125724148 96701 - protein coding gene SHC (Src homology 2 domain containing) family, member 4
Cpgi12198 2 125660844 to 125661078 234 CpG island CpG island 12198
D2Mit105 2 125665713 to 125665820 107 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 105
Cpgi12199 2 125672655 to 125673710 1055 CpG island CpG island 12199
Tssr19899 2 125673077 to 125673133 56 + TSS region transcription start site region 19899
Eid1 2 125673095 to 125674785 1690 + protein coding gene EP300 interacting inhibitor of differentiation 1
Tssr19900 2 125673149 to 125673184 35 + TSS region transcription start site region 19900
Tssr19901 2 125673683 to 125673694 11 + TSS region transcription start site region 19901
Tssr19902 2 125674054 to 125674074 20 + TSS region transcription start site region 19902
Gm35231 2 125692933 to 125694813 1880 + lncRNA gene predicted gene, 35231
Cpgi12200 2 125723069 to 125723634 565 CpG island CpG island 12200
Tssr26008 2 125723524 to 125723537 13 - TSS region transcription start site region 26008
Tssr26009 2 125723657 to 125723691 34 - TSS region transcription start site region 26009
Tssr26010 2 125723707 to 125723723 16 - TSS region transcription start site region 26010
D2Mit398 2 125725594 to 125725738 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 398
D2Dcr70 2 125725636 to 125725735 99 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 70
Cpgi12201 2 125731797 to 125732134 337 CpG island CpG island 12201
BC026863 2 125732165 to 125733495 1330 unclassified gene cDNA sequence BC026863
Secisbp2l 2 125736986 to 125782870 45884 - protein coding gene SECIS binding protein 2-like
Tssr26011 2 125737885 to 125737890 5 - TSS region transcription start site region 26011
Tssr26012 2 125760382 to 125760403 21 - TSS region transcription start site region 26012
Tssr26013 2 125767984 to 125767988 4 - TSS region transcription start site region 26013
D2Dcr71 2 125772560 to 125772658 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 71
Tssr26014 2 125773412 to 125773470 58 - TSS region transcription start site region 26014
Tssr26015 2 125775607 to 125775629 22 - TSS region transcription start site region 26015
Tssr26016 2 125780563 to 125780586 23 - TSS region transcription start site region 26016
Cpgi12202 2 125782353 to 125783061 708 CpG island CpG island 12202
Tssr26017 2 125782712 to 125782730 18 - TSS region transcription start site region 26017
Tssr26018 2 125782734 to 125782772 38 - TSS region transcription start site region 26018
Tssr26019 2 125782774 to 125782802 28 - TSS region transcription start site region 26019
Tssr26020 2 125782815 to 125782826 11 - TSS region transcription start site region 26020
Tssr26021 2 125782834 to 125782845 11 - TSS region transcription start site region 26021
Tssr26022 2 125788358 to 125788364 6 - TSS region transcription start site region 26022