Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:124520209-125110307

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbvq2 2 115600000 to 124900000 9300000 QTL trabecular bone volume QTL 2
Sema6d 2 124089969 to 124667770 577801 + protein coding gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
Cpgi12190 2 124609682 to 124611058 1376 CpG island CpG island 12190
Tssr19871 2 124609881 to 124609904 23 + TSS region transcription start site region 19871
Tssr631 2 124610068 to 124610131 63 + TSS region transcription start site region 631
Tssr19872 2 124610278 to 124610285 7 + TSS region transcription start site region 19872
Tssr19873 2 124610422 to 124610436 14 + TSS region transcription start site region 19873
Tssr19874 2 124610592 to 124610613 21 + TSS region transcription start site region 19874
Tssr19875 2 124649342 to 124649348 6 + TSS region transcription start site region 19875
Gm34484 2 124705850 to 124720962 15112 - lncRNA gene predicted gene, 34484
Gm13994 2 124708655 to 124711083 2428 + lincRNA gene predicted gene 13994
Tssr25993 2 124711095 to 124711106 11 - TSS region transcription start site region 25993
Tssr25994 2 124711537 to 124711542 5 - TSS region transcription start site region 25994
D2Mit16a 2 124727634 to 124727860 226 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 16a
D2Mit16b 2 124727695 to 124727860 165 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 16b
D2Mit16.1 2 124727844 to 124727971 127 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 16.1
Gm39920 2 124730386 to 124788925 58539 - lncRNA gene predicted gene, 39920
D2Mit337 2 124751798 to 124751921 123 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 337
D2Dcr69 2 124815209 to 124815307 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 69
Tssr19876 2 125018893 to 125018895 2 + TSS region transcription start site region 19876
Tssr19877 2 125068118 to 125068133 15 + TSS region transcription start site region 19877
Slc24a5 2 125068127 to 125088677 20550 + protein coding gene solute carrier family 24, member 5
Tssr19878 2 125068148 to 125068163 15 + TSS region transcription start site region 19878
Myef2 2 125084628 to 125123661 39033 - protein coding gene myelin basic protein expression factor 2, repressor
Tssr25995 2 125088671 to 125088678 7 - TSS region transcription start site region 25995
Tssr25996 2 125100888 to 125100892 4 - TSS region transcription start site region 25996
Gm22352 2 125105009 to 125105115 106 + snRNA gene predicted gene, 22352