Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:12302417-13101853

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E030013I19Rik 2 12301246 to 12312315 11069 + antisense lncRNA gene RIKEN cDNA E030013I19 gene
Mindy3 2 12347263 to 12419470 72207 - protein coding gene MINDY lysine 48 deubiquitinase 3
Gm37289 2 12357095 to 12358496 1401 - unclassified gene predicted gene, 37289
Gm37255 2 12372212 to 12375271 3059 - unclassified gene predicted gene, 37255
Gm38014 2 12389872 to 12392483 2611 - unclassified gene predicted gene, 38014
Cpgi11210 2 12418613 to 12419539 926 CpG island CpG island 11210
Tssr22669 2 12419387 to 12419399 12 - TSS region transcription start site region 22669
Tssr22670 2 12419401 to 12419419 18 - TSS region transcription start site region 22670
Tssr22671 2 12419427 to 12419448 21 - TSS region transcription start site region 22671
Tssr22672 2 12419456 to 12419474 18 - TSS region transcription start site region 22672
Gm13321 2 12421627 to 12422026 399 - pseudogene predicted gene 13321
D2Mit429 2 12474345 to 12474466 121 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 429
Gm37565 2 12697417 to 12706853 9436 + lincRNA gene predicted gene, 37565
Tssr22673 2 12877781 to 12877786 5 - TSS region transcription start site region 22673
Cpgi11211 2 12924007 to 12924274 267 CpG island CpG island 11211
Pter 2 12924041 to 13003455 79414 + protein coding gene phosphotriesterase related
Tssr16180 2 12924053 to 12924113 60 + TSS region transcription start site region 16180
Tssr16181 2 12924120 to 12924134 14 + TSS region transcription start site region 16181
Tssr16182 2 12924136 to 12924143 7 + TSS region transcription start site region 16182
Tssr16183 2 12938679 to 12938683 4 + TSS region transcription start site region 16183
Tssr22674 2 12979609 to 12979610 1 - TSS region transcription start site region 22674
C1ql3 2 13003457 to 13011806 8349 - protein coding gene C1q-like 3
Gm37824 2 13004365 to 13007600 3235 + unclassified gene predicted gene, 37824
Gm37811 2 13009886 to 13012486 2600 + unclassified gene predicted gene, 37811
Cpgi11212 2 13009906 to 13011728 1822 CpG island CpG island 11212
Tssr22675 2 13010815 to 13010864 49 - TSS region transcription start site region 22675
Tssr22676 2 13010899 to 13010919 20 - TSS region transcription start site region 22676
Tssr22677 2 13011039 to 13011048 9 - TSS region transcription start site region 22677
Tssr22678 2 13011074 to 13011107 33 - TSS region transcription start site region 22678
Tssr22679 2 13011566 to 13011577 11 - TSS region transcription start site region 22679
Tssr22680 2 13011600 to 13011629 29 - TSS region transcription start site region 22680
Tssr22681 2 13011630 to 13011657 27 - TSS region transcription start site region 22681
Tssr22682 2 13011672 to 13011686 14 - TSS region transcription start site region 22682
Tssr22683 2 13011756 to 13011778 22 - TSS region transcription start site region 22683
Gm37356 2 13012624 to 13014236 1612 + unclassified gene predicted gene, 37356
Gm37742 2 13036126 to 13040104 3978 + unclassified gene predicted gene, 37742
1700016C23Rik 2 13042600 to 13045492 2892 unclassified gene RIKEN cDNA 1700016C23 gene
Rsu1 2 13076967 to 13271416 194449 - protein coding gene Ras suppressor protein 1