Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:121071168-121298770

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgm5 2 121046111 to 121085759 39648 - protein coding gene transglutaminase 5
Tssr25896 2 121085733 to 121085744 11 - TSS region transcription start site region 25896
Tssr25897 2 121085746 to 121085753 7 - TSS region transcription start site region 25897
Tssr25898 2 121085778 to 121085794 16 - TSS region transcription start site region 25898
Tssr25899 2 121085835 to 121085846 11 - TSS region transcription start site region 25899
Tgm7 2 121093565 to 121109795 16230 - protein coding gene transglutaminase 7
Tssr25900 2 121101160 to 121101165 5 - TSS region transcription start site region 25900
Tssr25901 2 121116438 to 121116447 9 - TSS region transcription start site region 25901
Tssr25902 2 121116454 to 121116465 11 - TSS region transcription start site region 25902
D2Ertd616e 2 121121284 to 121121509 225 DNA segment DNA segment, Chr 2, ERATO Doi 616, expressed
Gm23858 2 121135191 to 121135296 105 - snRNA gene predicted gene, 23858
Lcmt2 2 121137292 to 121140698 3406 - protein coding gene leucine carboxyl methyltransferase 2
Cpgi12150 2 121139400 to 121140775 1375 CpG island CpG island 12150
Tssr25903 2 121140343 to 121140362 19 - TSS region transcription start site region 25903
Tssr25904 2 121140371 to 121140394 23 - TSS region transcription start site region 25904
Tssr19729 2 121140407 to 121140461 54 + TSS region transcription start site region 19729
Adal 2 121140428 to 121156680 16252 + protein coding gene adenosine deaminase-like
Tssr19730 2 121140501 to 121140530 29 + TSS region transcription start site region 19730
Tssr25905 2 121140622 to 121140632 10 - TSS region transcription start site region 25905
Tssr25906 2 121140649 to 121140690 41 - TSS region transcription start site region 25906
Tssr19731 2 121140739 to 121140767 28 + TSS region transcription start site region 19731
4921537I17Rik 2 121157427 to 121159436 2009 unclassified non-coding RNA gene RIKEN cDNA 4921537I17 gene
Zscan29 2 121158273 to 121171125 12852 - protein coding gene zinc finger SCAN domains 29
Tssr25907 2 121159735 to 121159749 14 - TSS region transcription start site region 25907
Tssr25908 2 121160156 to 121160171 15 - TSS region transcription start site region 25908
Tssr25909 2 121160207 to 121160219 12 - TSS region transcription start site region 25909
Tssr25910 2 121160302 to 121160324 22 - TSS region transcription start site region 25910
Tssr19732 2 121170178 to 121170180 2 + TSS region transcription start site region 19732
Cpgi12151 2 121170526 to 121171653 1127 CpG island CpG island 12151
Tssr19733 2 121170666 to 121170691 25 + TSS region transcription start site region 19733
Tssr25911 2 121171077 to 121171093 16 - TSS region transcription start site region 25911
Tssr25912 2 121171107 to 121171158 51 - TSS region transcription start site region 25912
Tssr19734 2 121171155 to 121171198 43 + TSS region transcription start site region 19734
Tubgcp4 2 121171168 to 121198770 27602 + protein coding gene tubulin, gamma complex associated protein 4
Tssr19735 2 121171204 to 121171279 75 + TSS region transcription start site region 19735
Tssr621 2 121171576 to 121171587 11 + TSS region transcription start site region 621
Tssr19736 2 121187440 to 121187471 31 + TSS region transcription start site region 19736
Trp53bp1 2 121193281 to 121271407 78126 - protein coding gene transformation related protein 53 binding protein 1
Tssr25913 2 121211967 to 121211977 10 - TSS region transcription start site region 25913
Tssr25914 2 121235802 to 121235846 44 - TSS region transcription start site region 25914
Tssr25915 2 121236056 to 121236102 46 - TSS region transcription start site region 25915
Tssr25916 2 121241831 to 121241835 4 - TSS region transcription start site region 25916
Cpgi12152 2 121270828 to 121271689 861 CpG island CpG island 12152
Tssr25917 2 121271315 to 121271322 7 - TSS region transcription start site region 25917
Tssr25918 2 121271355 to 121271397 42 - TSS region transcription start site region 25918
Tssr25919 2 121271403 to 121271410 7 - TSS region transcription start site region 25919
Cpgi12153 2 121289095 to 121290301 1206 CpG island CpG island 12153
Tssr19737 2 121289589 to 121289606 17 + TSS region transcription start site region 19737
Map1a 2 121289601 to 121310832 21231 + protein coding gene microtubule-associated protein 1 A
Tssr19738 2 121289699 to 121289710 11 + TSS region transcription start site region 19738
Tssr19739 2 121289722 to 121289736 14 + TSS region transcription start site region 19739
Tssr25920 2 121290298 to 121290309 11 - TSS region transcription start site region 25920
Gm14978 2 121293703 to 121296008 2305 - antisense lncRNA gene predicted gene 14978
Tssr19740 2 121295437 to 121295486 49 + TSS region transcription start site region 19740
D2Mit445 2 121297613 to 121297733 120 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 445
D2Dcr65 2 121297616 to 121297752 136 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 65
Tssr19741 2 121298592 to 121298608 16 + TSS region transcription start site region 19741