Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:120479878-120589912

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capn3 2 120463593 to 120504919 41326 + protein coding gene calpain 3
Tssr619 2 120480292 to 120480307 15 + TSS region transcription start site region 619
Tssr19697 2 120481949 to 120481975 26 + TSS region transcription start site region 19697
Tssr19698 2 120484331 to 120484342 11 + TSS region transcription start site region 19698
Tssr19699 2 120484343 to 120484355 12 + TSS region transcription start site region 19699
Tssr19700 2 120484359 to 120484374 15 + TSS region transcription start site region 19700
Tssr19701 2 120490083 to 120490113 30 + TSS region transcription start site region 19701
Tssr19702 2 120500054 to 120500066 12 + TSS region transcription start site region 19702
Tssr19703 2 120500457 to 120500468 11 + TSS region transcription start site region 19703
Tssr19704 2 120501211 to 120501253 42 + TSS region transcription start site region 19704
Tssr620 2 120501260 to 120501270 10 + TSS region transcription start site region 620
Tssr19705 2 120501307 to 120501335 28 + TSS region transcription start site region 19705
Tssr19706 2 120501818 to 120501829 11 + TSS region transcription start site region 19706
Tssr19707 2 120502319 to 120502332 13 + TSS region transcription start site region 19707
Tssr19708 2 120502510 to 120502532 22 + TSS region transcription start site region 19708
Zfp106 2 120506830 to 120563853 57023 - protein coding gene zinc finger protein 106
Gm26899 2 120532904 to 120539846 6942 + lincRNA gene predicted gene, 26899
Tssr25865 2 120534878 to 120534912 34 - TSS region transcription start site region 25865
Tssr25866 2 120539483 to 120539496 13 - TSS region transcription start site region 25866
Tssr25867 2 120539852 to 120539866 14 - TSS region transcription start site region 25867
D2Dcr28 2 120545224 to 120545575 351 DNA segment DNA segment, Chr 2, Derry C. Roopenian 28
Cpgi12141 2 120563331 to 120564019 688 CpG island CpG island 12141
Tssr25868 2 120563744 to 120563755 11 - TSS region transcription start site region 25868
Tssr25869 2 120563795 to 120563878 83 - TSS region transcription start site region 25869
Cpgi12142 2 120567480 to 120568148 668 CpG island CpG island 12142
Tssr19709 2 120567652 to 120567678 26 + TSS region transcription start site region 19709
Snap23 2 120567671 to 120601255 33584 + protein coding gene synaptosomal-associated protein 23
Tssr19710 2 120567687 to 120567726 39 + TSS region transcription start site region 19710
Tssr25870 2 120568109 to 120568118 9 - TSS region transcription start site region 25870
D2Dcr29 2 120574683 to 120574969 286 DNA segment DNA segment, Chr 2, Derry C. Roopenian 29
Tssr19711 2 120587769 to 120587772 3 + TSS region transcription start site region 19711