MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:115542653-115832832

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39911	2	115550712 to 115552808	2096	+	lncRNA gene	predicted gene, 39911
Gm13977	2	115556786 to 115581555	24769	-	antisense lncRNA gene	predicted gene 13977
Cpgi12058	2	115581226 to 115581874	648		CpG island	CpG island 12058
Tssr19462	2	115581651 to 115581665	14	+	TSS region	transcription start site region 19462
Tssr19463	2	115581667 to 115581743	76	+	TSS region	transcription start site region 19463
BC052040	2	115581716 to 115778768	197052	+	protein coding gene	cDNA sequence BC052040
Tssr19464	2	115581765 to 115581792	27	+	TSS region	transcription start site region 19464
Tssr19465	2	115581795 to 115581822	27	+	TSS region	transcription start site region 19465
Tssr19466	2	115599185 to 115599200	15	+	TSS region	transcription start site region 19466
Tbvq2	2	115600000 to 124900000	9300000		QTL	trabecular bone volume QTL 2
Mir1951	2	115638725 to 115638813	88	+	miRNA gene	microRNA 1951
D2Mit335	2	115687653 to 115687832	179		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 335
D230044P21Rik	2	115695866 to 115701068	5202		unclassified gene	RIKEN cDNA D230044P21 gene
Gm31474	2	115727921 to 115743203	15282	-	lncRNA gene	predicted gene, 31474
5730575I04Rik	2	115768001 to 115770011	2010		unclassified gene	RIKEN cDNA 5730575I04 gene
Tssr25710	2	115780540 to 115780548	8	-	TSS region	transcription start site region 25710
D2Ertd337e	2	115803321 to 115803524	203		DNA segment	DNA segment, Chr 2, ERATO Doi 337, expressed
Gm31590	2	115807023 to 115811563	4540	+	lncRNA gene	predicted gene, 31590