Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:114580550-115692786

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dph6 2 114516416 to 114654964 138548 - protein coding gene diphthamine biosynthesis 6
Gm13972 2 114654425 to 114697839 43414 + unclassified non-coding RNA gene predicted gene 13972
Cpgi12057 2 114654443 to 114655077 634 CpG island CpG island 12057
Tssr25705 2 114654861 to 114654915 54 - TSS region transcription start site region 25705
Tssr25706 2 114654922 to 114654939 17 - TSS region transcription start site region 25706
Tssr25707 2 114654943 to 114654969 26 - TSS region transcription start site region 25707
D2Mit275 2 114692249 to 114692432 183 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 275
Gm13975 2 114708112 to 114708893 781 + pseudogene predicted gene 13975
Gm13974 2 114854093 to 115043972 189879 + lincRNA gene predicted gene 13974
Gm28494 2 114897916 to 115220708 322792 - lincRNA gene predicted gene 28494
Gm28492 2 114938570 to 114939588 1018 + sense intronic lncRNA gene predicted gene 28492
Gm13973 2 115036419 to 115037312 893 - pseudogene predicted gene 13973
D2Mit101 2 115079495 to 115079684 189 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 101
Dntcs2 2 115079684 to 40995481 -74084203 QTL dental caries susceptibility 2
Gm28493 2 115135550 to 115137786 2236 + lincRNA gene predicted gene 28493
4930528P14Rik 2 115329266 to 115344280 15014 - lincRNA gene RIKEN cDNA 4930528P14 gene
Gm18967 2 115333183 to 115333743 560 + pseudogene predicted gene, 18967
4930546E12Rik 2 115333947 to 115334537 590 unclassified gene RIKEN cDNA 4930546E12 gene
Tssr25708 2 115344276 to 115344283 7 - TSS region transcription start site region 25708
Tssr25709 2 115344287 to 115344297 10 - TSS region transcription start site region 25709
Gm13976 2 115344385 to 115346968 2583 + lincRNA gene predicted gene 13976
Gm31351 2 115371171 to 115379216 8045 - lncRNA gene predicted gene, 31351
Gm31413 2 115380093 to 115383357 3264 - lncRNA gene predicted gene, 31413
Gm39910 2 115402078 to 115410267 8189 - lncRNA gene predicted gene, 39910
3110099E03Rik 2 115493513 to 115512201 18688 - lincRNA gene RIKEN cDNA 3110099E03 gene
Gm39911 2 115550712 to 115552808 2096 + lncRNA gene predicted gene, 39911
Gm13977 2 115556786 to 115581555 24769 - antisense lncRNA gene predicted gene 13977
Cpgi12058 2 115581226 to 115581874 648 CpG island CpG island 12058
Tssr19462 2 115581651 to 115581665 14 + TSS region transcription start site region 19462
Tssr19463 2 115581667 to 115581743 76 + TSS region transcription start site region 19463
BC052040 2 115581716 to 115778768 197052 + protein coding gene cDNA sequence BC052040
Tssr19464 2 115581765 to 115581792 27 + TSS region transcription start site region 19464
Tssr19465 2 115581795 to 115581822 27 + TSS region transcription start site region 19465
Tssr19466 2 115599185 to 115599200 15 + TSS region transcription start site region 19466
Tbvq2 2 115600000 to 124900000 9300000 QTL trabecular bone volume QTL 2
Mir1951 2 115638725 to 115638813 88 + miRNA gene microRNA 1951
D2Mit335 2 115687653 to 115687832 179 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 335