Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:114158112-115258893

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aqr 2 114101161 to 114175339 74178 - protein coding gene aquarius
Cpgi12055 2 114174929 to 114175417 488 CpG island CpG island 12055
Tssr25700 2 114175274 to 114175293 19 - TSS region transcription start site region 25700
Tssr25701 2 114175299 to 114175317 18 - TSS region transcription start site region 25701
Tssr25702 2 114175321 to 114175344 23 - TSS region transcription start site region 25702
Zfp770 2 114193456 to 114201432 7976 - protein coding gene zinc finger protein 770
Tssr19460 2 114200215 to 114200218 3 + TSS region transcription start site region 19460
Cpgi12056 2 114201085 to 114201657 572 CpG island CpG island 12056
Tssr25703 2 114201416 to 114201445 29 - TSS region transcription start site region 25703
Tssr25704 2 114228676 to 114228681 5 - TSS region transcription start site region 25704
Gm25103 2 114270111 to 114270428 317 + unclassified non-coding RNA gene predicted gene, 25103
Gm29234 2 114272174 to 114273435 1261 - lincRNA gene predicted gene 29234
Lmr28d 2 114292889 to 114293051 162 QTL leishmaniasis resistance 28d
D2Mit102 2 114292889 to 114293051 162 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 102
Lmr28c 2 114292889 to 114293051 162 QTL leishmaniasis resistance 28c
Actre14 2 114292889 to 118112609 3819720 QTL activity response to ethanol 14
Parms1 2 114293051 to 74693773 -39599278 QTL patched associated RMS 1
Tssr19461 2 114294493 to 114294495 2 + TSS region transcription start site region 19461
Gmmq2 2 114379883 to 114379883 0 QTL gastrocnemius muscle mass QTL 2
Edlmmq2 2 114379883 to 114379883 0 QTL extensor digitorum longus muscle mass QTL 2
Gm31146 2 114421421 to 114430323 8902 - lncRNA gene predicted gene, 31146
D2Mit274 2 114457594 to 114457722 128 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 274
T2dm3 2 114457594 to 132872237 18414643 QTL type 2 diabetes mellitus 3
Dph6 2 114516416 to 114654964 138548 - protein coding gene diphthamine biosynthesis 6
Gm13972 2 114654425 to 114697839 43414 + unclassified non-coding RNA gene predicted gene 13972
Cpgi12057 2 114654443 to 114655077 634 CpG island CpG island 12057
Tssr25705 2 114654861 to 114654915 54 - TSS region transcription start site region 25705
Tssr25706 2 114654922 to 114654939 17 - TSS region transcription start site region 25706
Tssr25707 2 114654943 to 114654969 26 - TSS region transcription start site region 25707
D2Mit275 2 114692249 to 114692432 183 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 275
Gm13975 2 114708112 to 114708893 781 + pseudogene predicted gene 13975
Gm13974 2 114854093 to 115043972 189879 + lincRNA gene predicted gene 13974
Gm28494 2 114897916 to 115220708 322792 - lincRNA gene predicted gene 28494
Gm28492 2 114938570 to 114939588 1018 + sense intronic lncRNA gene predicted gene 28492
Gm13973 2 115036419 to 115037312 893 - pseudogene predicted gene 13973
D2Mit101 2 115079495 to 115079684 189 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 101
Dntcs2 2 115079684 to 40995481 -74084203 QTL dental caries susceptibility 2
Gm28493 2 115135550 to 115137786 2236 + lincRNA gene predicted gene 28493