Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6970528-6994168

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10536 19 6969048 to 6970529 1481 CpG island CpG island 10536
Cpgi10537 19 6974222 to 6975749 1527 CpG island CpG island 10537
Tssr154704 19 6974613 to 6974682 69 + TSS region transcription start site region 154704
Tssr154705 19 6974951 to 6975003 52 + TSS region transcription start site region 154705
Tssr154706 19 6975048 to 6975071 23 + TSS region transcription start site region 154706
Ppp1r14b 19 6975048 to 6977324 2276 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 14B
Tssr154707 19 6975076 to 6975104 28 + TSS region transcription start site region 154707
Tssr154708 19 6975111 to 6975118 7 + TSS region transcription start site region 154708
Tssr154709 19 6975122 to 6975125 3 + TSS region transcription start site region 154709
Tssr154710 19 6975138 to 6975158 20 + TSS region transcription start site region 154710
Tssr154711 19 6975212 to 6975231 19 + TSS region transcription start site region 154711
Tssr154712 19 6976373 to 6976384 11 + TSS region transcription start site region 154712
Tssr154713 19 6976415 to 6976453 38 + TSS region transcription start site region 154713
Tssr154714 19 6976456 to 6976466 10 + TSS region transcription start site region 154714
Tssr154715 19 6976474 to 6976497 23 + TSS region transcription start site region 154715
Tssr154716 19 6976500 to 6976524 24 + TSS region transcription start site region 154716
Fkbp2 19 6977741 to 6980461 2720 - protein coding gene FK506 binding protein 2
Tssr157908 19 6979135 to 6979159 24 - TSS region transcription start site region 157908
Cpgi10538 19 6979393 to 6980878 1485 CpG island CpG island 10538
Tssr157909 19 6979874 to 6979896 22 - TSS region transcription start site region 157909
Tssr157910 19 6980420 to 6980481 61 - TSS region transcription start site region 157910
Gm41803 19 6980528 to 6984168 3640 + lncRNA gene predicted gene, 41803
Tssr5426 19 6980582 to 6980614 32 + TSS region transcription start site region 5426
Tssr154717 19 6980621 to 6980638 17 + TSS region transcription start site region 154717
Vegfb 19 6982473 to 6987651 5178 - protein coding gene vascular endothelial growth factor B
Tssr157911 19 6985439 to 6985466 27 - TSS region transcription start site region 157911
Tssr154718 19 6986018 to 6986067 49 + TSS region transcription start site region 154718
Cpgi10539 19 6987030 to 6988290 1260 CpG island CpG island 10539
Tssr157912 19 6987413 to 6987446 33 - TSS region transcription start site region 157912
Tssr157913 19 6987460 to 6987517 57 - TSS region transcription start site region 157913
Tssr157914 19 6987521 to 6987534 13 - TSS region transcription start site region 157914
Tssr157915 19 6987591 to 6987618 27 - TSS region transcription start site region 157915
Tssr157916 19 6987621 to 6987764 143 - TSS region transcription start site region 157916
Dnajc4 19 6987911 to 6992503 4592 - protein coding gene DnaJ heat shock protein family (Hsp40) member C4
Cpgi10540 19 6992139 to 6992888 749 CpG island CpG island 10540
Tssr157917 19 6992478 to 6992524 46 - TSS region transcription start site region 157917
Tssr157918 19 6992570 to 6992594 24 - TSS region transcription start site region 157918
Gm35838 19 6992674 to 6993046 372 + lncRNA gene predicted gene, 35838
Nudt22 19 6993019 to 6996115 3096 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 22