Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:60769749-61212553

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif3a 19 60761116 to 60790693 29577 - protein coding gene eukaryotic translation initiation factor 3, subunit A
Tssr160054 19 60769927 to 60769938 11 - TSS region transcription start site region 160054
Tssr160055 19 60769939 to 60769954 15 - TSS region transcription start site region 160055
Tssr160056 19 60769960 to 60770000 40 - TSS region transcription start site region 160056
Tssr160057 19 60770012 to 60770023 11 - TSS region transcription start site region 160057
Tssr160058 19 60771035 to 60771072 37 - TSS region transcription start site region 160058
Tssr160059 19 60771673 to 60771690 17 - TSS region transcription start site region 160059
Tssr160060 19 60771696 to 60771707 11 - TSS region transcription start site region 160060
Tssr160061 19 60771717 to 60771744 27 - TSS region transcription start site region 160061
Tssr160062 19 60772715 to 60772726 11 - TSS region transcription start site region 160062
Tssr160063 19 60772734 to 60772760 26 - TSS region transcription start site region 160063
Tssr160064 19 60772888 to 60772941 53 - TSS region transcription start site region 160064
Tssr160065 19 60773928 to 60773952 24 - TSS region transcription start site region 160065
Mir3084-2 19 60774329 to 60774397 68 - miRNA gene microRNA 3084-2
Snora19 19 60774330 to 60774385 55 - snoRNA gene small nucleolar RNA, H/ACA box 19
Gm26158 19 60775521 to 60775639 118 - snoRNA gene predicted gene, 26158
Tssr160066 19 60775809 to 60775823 14 - TSS region transcription start site region 160066
Tssr160067 19 60776652 to 60776713 61 - TSS region transcription start site region 160067
Tssr160068 19 60782210 to 60782221 11 - TSS region transcription start site region 160068
Tssr160069 19 60787833 to 60787837 4 - TSS region transcription start site region 160069
Cpgi11138 19 60789883 to 60791163 1280 CpG island CpG island 11138
Gm10751 19 60790019 to 60791665 1646 protein coding gene predicted gene 10751
Tssr160070 19 60790563 to 60790570 7 - TSS region transcription start site region 160070
Tssr160071 19 60790584 to 60790602 18 - TSS region transcription start site region 160071
Tssr160072 19 60790617 to 60790672 55 - TSS region transcription start site region 160072
Tssr160073 19 60790692 to 60790700 8 - TSS region transcription start site region 160073
Tssr160074 19 60790708 to 60790713 5 - TSS region transcription start site region 160074
Tssr160075 19 60791010 to 60791053 43 - TSS region transcription start site region 160075
Cpgi11139 19 60811276 to 60812020 744 CpG island CpG island 11139
Tssr157365 19 60811574 to 60811619 45 + TSS region transcription start site region 157365
Fam45a 19 60811585 to 60836227 24642 + protein coding gene family with sequence similarity 45, member A
Tssr157366 19 60811836 to 60811879 43 + TSS region transcription start site region 157366
Tssr160076 19 60812189 to 60812208 19 - TSS region transcription start site region 160076
Tssr5575 19 60812220 to 60812221 1 - TSS region transcription start site region 5575
Gm15959 19 60815449 to 60815816 367 - pseudogene predicted gene 15959
Sfxn4 19 60837277 to 60861479 24202 - protein coding gene sideroflexin 4
Tssr160077 19 60860656 to 60860659 3 - TSS region transcription start site region 160077
Cpgi11140 19 60861202 to 60861653 451 CpG island CpG island 11140
Tssr160078 19 60861390 to 60861462 72 - TSS region transcription start site region 160078
Prdx3 19 60864066 to 60874538 10472 - protein coding gene peroxiredoxin 3
Tssr160079 19 60864201 to 60864205 4 - TSS region transcription start site region 160079
Tssr160080 19 60864432 to 60864450 18 - TSS region transcription start site region 160080
Cpgi11141 19 60874251 to 60874715 464 CpG island CpG island 11141
Tssr160081 19 60874472 to 60874510 38 - TSS region transcription start site region 160081
Tssr160082 19 60874526 to 60874550 24 - TSS region transcription start site region 160082
Tssr160083 19 60874564 to 60874568 4 - TSS region transcription start site region 160083
Cpgi11142 19 60889657 to 60890836 1179 CpG island CpG island 11142
Grk5 19 60889749 to 61092553 202804 + protein coding gene G protein-coupled receptor kinase 5
Tssr5576 19 60890289 to 60890299 10 + TSS region transcription start site region 5576
Tssr157367 19 60890363 to 60890392 29 + TSS region transcription start site region 157367
Tssr157368 19 60896209 to 60896212 3 + TSS region transcription start site region 157368
6030458E02Rik 19 60914611 to 60915766 1155 unclassified gene RIKEN cDNA 6030458E02 gene
Gm41885 19 60926467 to 60933440 6973 - protein coding gene predicted gene, 41885
Gm9529 19 60966672 to 60967254 582 - pseudogene predicted gene 9529
Tssr160084 19 60994272 to 60994298 26 - TSS region transcription start site region 160084
D19Jpk2 19 61009715 to 61009840 125 DNA segment DNA segment, Chr 19, Japan, Kominami 2
Gm22520 19 61013417 to 61013545 128 - snoRNA gene predicted gene, 22520
D19Dcr72 19 61013584 to 61013679 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 72
Tssr157369 19 61050892 to 61050894 2 + TSS region transcription start site region 157369
Zfp950 19 61053840 to 61140840 87000 - protein coding gene zinc finger protein 950
Tssr160085 19 61122609 to 61122613 4 - TSS region transcription start site region 160085
Gm4238 19 61134834 to 61135218 384 + pseudogene predicted gene 4238
Tssr160086 19 61140748 to 61140769 21 - TSS region transcription start site region 160086
Tssr160087 19 61140772 to 61140823 51 - TSS region transcription start site region 160087
Tssr157370 19 61151603 to 61151618 15 + TSS region transcription start site region 157370
Cpgi11143 19 61151821 to 61152091 270 CpG island CpG island 11143
Tssr157371 19 61151838 to 61151871 33 + TSS region transcription start site region 157371
Gm22365 19 61164365 to 61164481 116 - snRNA gene predicted gene, 22365
Gm5521 19 61166962 to 61168763 1801 + pseudogene predicted gene 5521
Tssr157372 19 61166973 to 61166979 6 + TSS region transcription start site region 157372
Gm7102 19 61174686 to 61176309 1623 - protein coding gene predicted gene 7102
Cpgi11144 19 61175758 to 61176297 539 CpG island CpG island 11144
Tssr157373 19 61176098 to 61176122 24 + TSS region transcription start site region 157373
Gm6020 19 61183890 to 61183955 65 + pseudogene predicted gene 6020
Tssr160088 19 61198749 to 61198767 18 - TSS region transcription start site region 160088
Tssr160089 19 61198769 to 61198781 12 - TSS region transcription start site region 160089
Cpgi11145 19 61199426 to 61199878 452 CpG island CpG island 11145