Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:41961763-42054641

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mms19 19 41943707 to 41981165 37458 - protein coding gene MMS19 cytosolic iron-sulfur assembly component
Tssr159333 19 41964601 to 41964604 3 - TSS region transcription start site region 159333
Tssr159334 19 41966658 to 41966661 3 - TSS region transcription start site region 159334
B130065D12Rik 19 41972104 to 41974521 2417 unclassified gene RIKEN cDNA B130065D12 gene
Gm23113 19 41975188 to 41975286 98 + snRNA gene predicted gene, 23113
Cpgi10840 19 41980502 to 41982781 2279 CpG island CpG island 10840
Tssr5516 19 41981113 to 41981118 5 - TSS region transcription start site region 5516
Tssr159335 19 41981119 to 41981150 31 - TSS region transcription start site region 159335
Tssr156451 19 41981227 to 41981246 19 + TSS region transcription start site region 156451
Tssr156452 19 41981255 to 41981283 28 + TSS region transcription start site region 156452
Tssr156453 19 41981323 to 41981349 26 + TSS region transcription start site region 156453
Tssr156454 19 41981470 to 41981481 11 + TSS region transcription start site region 156454
Tssr156455 19 41981623 to 41981638 15 + TSS region transcription start site region 156455
Tssr156456 19 41981661 to 41981706 45 + TSS region transcription start site region 156456
Tssr156457 19 41981709 to 41981778 69 + TSS region transcription start site region 156457
Ubtd1 19 41981763 to 42034641 52878 + protein coding gene ubiquitin domain containing 1
Tssr5517 19 41981787 to 41981798 11 + TSS region transcription start site region 5517
E130107B13Rik 19 41986562 to 41990399 3837 unclassified gene RIKEN cDNA E130107B13 gene
Ebm1 19 42000000 to 42000000 0 QTL Epidermolysis Bullosa modifier 1
D19Dcr29 19 42001344 to 42001439 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 29
Tssr156458 19 42019390 to 42019411 21 + TSS region transcription start site region 156458
D19Dcr30 19 42020274 to 42020369 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 30
Tssr156459 19 42022199 to 42022217 18 + TSS region transcription start site region 156459
Tssr156460 19 42036025 to 42036032 7 + TSS region transcription start site region 156460
Ankrd2 19 42036038 to 42045110 9072 + protein coding gene ankyrin repeat domain 2 (stretch responsive muscle)
D19Dcr31 19 42036420 to 42036519 99 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 31
Tssr156461 19 42041629 to 42041643 14 + TSS region transcription start site region 156461
Hoga1 19 42045851 to 42070939 25088 + protein coding gene 4-hydroxy-2-oxoglutarate aldolase 1
Tssr156462 19 42045858 to 42045897 39 + TSS region transcription start site region 156462
Tssr156463 19 42046789 to 42046791 2 + TSS region transcription start site region 156463
Tssr156464 19 42051759 to 42051767 8 + TSS region transcription start site region 156464
Tssr156465 19 42051771 to 42051779 8 + TSS region transcription start site region 156465
Tssr156466 19 42051784 to 42051832 48 + TSS region transcription start site region 156466
Tssr156467 19 42051841 to 42051846 5 + TSS region transcription start site region 156467
Tssr156468 19 42052240 to 42052258 18 + TSS region transcription start site region 156468
4933411K16Rik 19 42052248 to 42053627 1379 + protein coding gene RIKEN cDNA 4933411K16 gene
Tssr156469 19 42052259 to 42052275 16 + TSS region transcription start site region 156469
Tssr156470 19 42052283 to 42052284 1 + TSS region transcription start site region 156470
Tssr156471 19 42052743 to 42052760 17 + TSS region transcription start site region 156471
Tssr156472 19 42052821 to 42052833 12 + TSS region transcription start site region 156472
Tssr156473 19 42052950 to 42052957 7 + TSS region transcription start site region 156473
Tssr156474 19 42052985 to 42052996 11 + TSS region transcription start site region 156474
Tssr156475 19 42053040 to 42053049 9 + TSS region transcription start site region 156475
Tssr159336 19 42053069 to 42053077 8 - TSS region transcription start site region 159336
Tssr159337 19 42053086 to 42053089 3 - TSS region transcription start site region 159337