MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:61629874-61649885

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35607	18	61628032 to 61642168	14136	-	lncRNA gene	predicted gene, 35607
Tssr153579	18	61632515 to 61632540	25	-	TSS region	transcription start site region 153579
Tssr153580	18	61632681 to 61632691	10	-	TSS region	transcription start site region 153580
Tssr151477	18	61632710 to 61632725	15	+	TSS region	transcription start site region 151477
Tssr151478	18	61632940 to 61632982	42	+	TSS region	transcription start site region 151478
Tssr153581	18	61635389 to 61635396	7	-	TSS region	transcription start site region 153581
Tssr151479	18	61639603 to 61639632	29	+	TSS region	transcription start site region 151479
Bvht	18	61639653 to 61647485	7832	+	lincRNA gene	braveheart long non-coding RNA
Tssr153582	18	61639874 to 61639885	11	-	TSS region	transcription start site region 153582
Tssr153583	18	61646316 to 61646321	5	-	TSS region	transcription start site region 153583
Tssr153584	18	61646667 to 61646673	6	-	TSS region	transcription start site region 153584
Cpgi10112	18	61647744 to 61648014	270		CpG island	CpG island 10112
Tssr153585	18	61647824 to 61647828	4	-	TSS region	transcription start site region 153585
Mirc32	18	61647825 to 61649258	1433		complex/cluster/region	microRNA cluster 32, including Mir143 and Mir145a
Mir145a	18	61647825 to 61647894	69	-	miRNA gene	microRNA 145a
Cpgi10113	18	61649120 to 61649331	211		CpG island	CpG island 10113
Mir143	18	61649196 to 61649258	62	-	miRNA gene	microRNA 143
Carmn	18	61649625 to 61665537	15912	-	lincRNA gene	cardiac mesoderm enhancer-associated non-coding RNA