Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83566806-83766827

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34801 17 83555711 to 83567901 12190 - lncRNA gene predicted gene, 34801
Tssr149600 17 83582254 to 83582258 4 - TSS region transcription start site region 149600
Tssr149601 17 83585527 to 83585528 1 - TSS region transcription start site region 149601
Kcng3 17 83585957 to 83631895 45938 - protein coding gene potassium voltage-gated channel, subfamily G, member 3
Cpgi9555 17 83630714 to 83632877 2163 CpG island CpG island 9555
Tssr149602 17 83631892 to 83631934 42 - TSS region transcription start site region 149602
Tssr149603 17 83654669 to 83654681 12 - TSS region transcription start site region 149603
Tssr149604 17 83654702 to 83654750 48 - TSS region transcription start site region 149604
Tssr145990 17 83666806 to 83666827 21 + TSS region transcription start site region 145990
Tssr145991 17 83666835 to 83666848 13 + TSS region transcription start site region 145991
Tssr149605 17 83690445 to 83690474 29 - TSS region transcription start site region 149605
Gm46598 17 83703013 to 83705935 2922 - lncRNA gene predicted gene, 46598
Cpgi9556 17 83705594 to 83706897 1303 CpG island CpG island 9556
Tssr145992 17 83705891 to 83705913 22 + TSS region transcription start site region 145992
Tssr145993 17 83706137 to 83706169 32 + TSS region transcription start site region 145993
Mta3 17 83706163 to 83821516 115353 + protein coding gene metastasis associated 3
Tssr145994 17 83706170 to 83706200 30 + TSS region transcription start site region 145994
Tssr145995 17 83706211 to 83706260 49 + TSS region transcription start site region 145995
Tssr149606 17 83706840 to 83706884 44 - TSS region transcription start site region 149606
D17Mit162 17 83718322 to 83718438 116 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 162
Tssr145996 17 83729141 to 83729151 10 + TSS region transcription start site region 145996
Tssr145997 17 83729192 to 83729202 10 + TSS region transcription start site region 145997