Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:80473550-80627813

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obrq15 17 57227447 to 80578347 23350900 QTL obesity resistance QTL 15
Sos1 17 80393752 to 80480453 86701 - protein coding gene SOS Ras/Rac guanine nucleotide exchange factor 1
Cpgi9535 17 80479291 to 80480728 1437 CpG island CpG island 9535
Tssr145968 17 80479390 to 80479434 44 + TSS region transcription start site region 145968
Tssr149490 17 80480414 to 80480434 20 - TSS region transcription start site region 149490
Tssr149491 17 80480435 to 80480462 27 - TSS region transcription start site region 149491
Tssr149492 17 80480463 to 80480474 11 - TSS region transcription start site region 149492
Tssr149493 17 80480478 to 80480487 9 - TSS region transcription start site region 149493
Cpgi9536 17 80482787 to 80483361 574 CpG island CpG island 9536
Cdkl4 17 80523550 to 80577813 54263 - protein coding gene cyclin-dependent kinase-like 4
Cpgi9537 17 80543543 to 80543813 270 CpG island CpG island 9537
Cpgi9538 17 80550276 to 80550528 252 CpG island CpG island 9538
Gm33373 17 80553464 to 80563942 10478 + lncRNA gene predicted gene, 33373
Cpgi9539 17 80553647 to 80554091 444 CpG island CpG island 9539
F420015M19Rik 17 80564011 to 80568111 4100 + protein coding gene RIKEN cDNA F420015M19 gene
Tssr149494 17 80564712 to 80564717 5 - TSS region transcription start site region 149494
Cpgi9540 17 80576966 to 80577622 656 CpG island CpG island 9540
Tssr149495 17 80577392 to 80577403 11 - TSS region transcription start site region 149495
Tssr149496 17 80577410 to 80577439 29 - TSS region transcription start site region 149496
Tssr149497 17 80577743 to 80577752 9 - TSS region transcription start site region 149497
Tssr149498 17 80577768 to 80577783 15 - TSS region transcription start site region 149498
D17Mit2 17 80578119 to 80578347 228 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 2
Aliq3 17 80578119 to 80578347 228 QTL acute lung injury QTL 3
Map4k3 17 80580513 to 80728205 147692 - protein coding gene mitogen-activated protein kinase kinase kinase kinase 3
Tssr149499 17 80598447 to 80598453 6 - TSS region transcription start site region 149499