Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:57075997-57219777

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dennd1c 17 57066051 to 57078510 12459 - protein coding gene DENN/MADD domain containing 1C
Tssr148877 17 57077042 to 57077067 25 - TSS region transcription start site region 148877
Tssr148878 17 57078410 to 57078417 7 - TSS region transcription start site region 148878
Tssr148879 17 57078447 to 57078458 11 - TSS region transcription start site region 148879
Tssr148880 17 57078459 to 57078484 25 - TSS region transcription start site region 148880
Tssr148881 17 57078490 to 57078519 29 - TSS region transcription start site region 148881
Tssr145371 17 57078566 to 57078609 43 + TSS region transcription start site region 145371
Tubb4a 17 57080066 to 57087782 7716 - protein coding gene tubulin, beta 4A class IVA
Tssr5182 17 57080219 to 57080244 25 + TSS region transcription start site region 5182
Tssr145372 17 57080247 to 57080285 38 + TSS region transcription start site region 145372
Tssr148882 17 57080362 to 57080415 53 - TSS region transcription start site region 148882
Tssr148883 17 57080457 to 57080508 51 - TSS region transcription start site region 148883
Tssr148884 17 57080530 to 57080577 47 - TSS region transcription start site region 148884
Tssr145373 17 57080594 to 57080605 11 + TSS region transcription start site region 145373
Tssr148885 17 57080607 to 57080625 18 - TSS region transcription start site region 148885
Tssr148886 17 57080634 to 57080646 12 - TSS region transcription start site region 148886
Tssr148887 17 57080658 to 57080662 4 - TSS region transcription start site region 148887
Tssr148888 17 57080685 to 57080705 20 - TSS region transcription start site region 148888
Tssr145374 17 57080688 to 57080721 33 + TSS region transcription start site region 145374
Tssr148889 17 57080722 to 57080729 7 - TSS region transcription start site region 148889
Tssr148890 17 57080818 to 57080830 12 - TSS region transcription start site region 148890
Tssr148891 17 57080936 to 57080950 14 - TSS region transcription start site region 148891
Tssr148892 17 57080956 to 57080969 13 - TSS region transcription start site region 148892
Cpgi9393 17 57081089 to 57081840 751 CpG island CpG island 9393
Tssr148893 17 57081170 to 57081182 12 - TSS region transcription start site region 148893
Tssr148894 17 57081242 to 57081254 12 - TSS region transcription start site region 148894
Tssr148895 17 57081646 to 57081658 12 - TSS region transcription start site region 148895
Tssr148896 17 57081708 to 57081725 17 - TSS region transcription start site region 148896
Cpgi9394 17 57087153 to 57087787 634 CpG island CpG island 9394
Tssr148897 17 57087557 to 57087612 55 - TSS region transcription start site region 148897
Tssr148898 17 57087614 to 57087636 22 - TSS region transcription start site region 148898
Tssr148899 17 57087637 to 57087657 20 - TSS region transcription start site region 148899
Tssr5183 17 57087659 to 57087669 10 - TSS region transcription start site region 5183
Tssr148900 17 57087729 to 57087734 5 - TSS region transcription start site region 148900
Gm11110 17 57092023 to 57105942 13919 - lincRNA gene predicted gene 11110
Cpgi9395 17 57096587 to 57096766 179 CpG island CpG island 9395
Gm46589 17 57096733 to 57098544 1811 + lncRNA gene predicted gene, 46589
Cpgi9396 17 57105192 to 57106114 922 CpG island CpG island 9396
Tnfsf9 17 57105325 to 57107757 2432 + protein coding gene tumor necrosis factor (ligand) superfamily, member 9
Tssr145375 17 57105401 to 57105421 20 + TSS region transcription start site region 145375
Tssr148901 17 57105916 to 57105948 32 - TSS region transcription start site region 148901
Tssr145376 17 57106632 to 57106643 11 + TSS region transcription start site region 145376
D17Mit252 17 57107800 to 57107924 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 252
Gm49892 17 57115118 to 57115447 329 + pseudogene predicted gene, 49892
Cd70 17 57145997 to 57149777 3780 - protein coding gene CD70 antigen
Gm33566 17 57148822 to 57171016 22194 + lncRNA gene predicted gene, 33566
Cpgi9397 17 57149148 to 57149768 620 CpG island CpG island 9397
Tssr148902 17 57149633 to 57149637 4 - TSS region transcription start site region 148902
Tssr148903 17 57172455 to 57172464 9 - TSS region transcription start site region 148903
Tnfsf14 17 57189492 to 57194177 4685 - protein coding gene tumor necrosis factor (ligand) superfamily, member 14
Cpgi9398 17 57190509 to 57190737 228 CpG island CpG island 9398
Tssr148904 17 57194079 to 57194108 29 - TSS region transcription start site region 148904
Tssr148905 17 57194170 to 57194190 20 - TSS region transcription start site region 148905
Tssr148906 17 57198294 to 57198319 25 - TSS region transcription start site region 148906
C3 17 57203970 to 57228136 24166 - protein coding gene complement component 3
Tssr148907 17 57205529 to 57205535 6 - TSS region transcription start site region 148907
Tssr148908 17 57206228 to 57206241 13 - TSS region transcription start site region 148908
Tssr148909 17 57207363 to 57207374 11 - TSS region transcription start site region 148909
Tssr148910 17 57207438 to 57207446 8 - TSS region transcription start site region 148910
Tssr148911 17 57207567 to 57207616 49 - TSS region transcription start site region 148911
Tssr148912 17 57209434 to 57209503 69 - TSS region transcription start site region 148912
Tssr148913 17 57209615 to 57209653 38 - TSS region transcription start site region 148913
Tssr148914 17 57210191 to 57210197 6 - TSS region transcription start site region 148914
Tssr148915 17 57210218 to 57210253 35 - TSS region transcription start site region 148915
Tssr148916 17 57210276 to 57210299 23 - TSS region transcription start site region 148916
Tssr148917 17 57211637 to 57211656 19 - TSS region transcription start site region 148917
Tssr148918 17 57211667 to 57211703 36 - TSS region transcription start site region 148918
Tssr148919 17 57211712 to 57211725 13 - TSS region transcription start site region 148919
Tssr148920 17 57212669 to 57212691 22 - TSS region transcription start site region 148920
Tssr148921 17 57212716 to 57212735 19 - TSS region transcription start site region 148921
Tssr148922 17 57213816 to 57213843 27 - TSS region transcription start site region 148922
Tssr148923 17 57214785 to 57214830 45 - TSS region transcription start site region 148923
Tssr148924 17 57214840 to 57214850 10 - TSS region transcription start site region 148924
Tssr148925 17 57215147 to 57215178 31 - TSS region transcription start site region 148925
Tssr148926 17 57215878 to 57215896 18 - TSS region transcription start site region 148926
Tssr148927 17 57217147 to 57217170 23 - TSS region transcription start site region 148927
Mir6978 17 57217172 to 57217228 56 - miRNA gene microRNA 6978
Tssr148928 17 57217888 to 57217899 11 - TSS region transcription start site region 148928
Tssr148929 17 57218132 to 57218144 12 - TSS region transcription start site region 148929
Tssr148930 17 57218192 to 57218197 5 - TSS region transcription start site region 148930
Tssr148931 17 57218506 to 57218525 19 - TSS region transcription start site region 148931
Tssr148932 17 57218656 to 57218668 12 - TSS region transcription start site region 148932
Tssr148933 17 57218872 to 57218892 20 - TSS region transcription start site region 148933